| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1014 |
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| Symbol | |
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| ID | 4922597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1173869 |
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| End bp | 1174375 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162547 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001093144 |
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| Protein GI | 127511947 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.145857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC GTAAACTACG TCTTCAACGG GCCTGGTCGC AGGAGCAACT GGCGCAGCAT
TCAGGGCTTA ATGTGCGCAC CATACAGCGC CTGGAGCGGG GACAGAAGGC GAGTCTCGAA
TCATTGAAAT CTTTAGCTTC GGTATTTGAG GTGCCTCTGG AGGCGCTGCA ACAGGAGATG
GATATGAGTA TGACAATGGA CAAGCAAACC GATGAAGCAG TTAATGAGAG CCTGGCGCCG
ATCAGCAGTG ATGAGCGCGC CGCCATCGAA TATGTCAAAG AGCTGAAAGG CTTCTACAGC
AACCTGGTGA CCATGGCGAT TGTCTTGCCG CTACTCTACC TGCTGAATCT GATGATAAGC
CCAGGTTATA TGTGGGTCTG GTGGGTGGTA ATGGGATGGG GCGGCGGCCT GGTGCTGCAC
GCCATCTCGG TATTTGAGCC TTTTAGCCTG TTTGGGGCGA GCTGGGAGAA ACGCCAGATT
GAGAAGCGAC TCAAGCGTAG GCTCTAG
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| Protein sequence | MIIRKLRLQR AWSQEQLAQH SGLNVRTIQR LERGQKASLE SLKSLASVFE VPLEALQQEM
DMSMTMDKQT DEAVNESLAP ISSDERAAIE YVKELKGFYS NLVTMAIVLP LLYLLNLMIS
PGYMWVWWVV MGWGGGLVLH AISVFEPFSL FGASWEKRQI EKRLKRRL
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