| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1010 |
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| Symbol | |
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| ID | 4920952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1167909 |
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| End bp | 1169036 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162543 |
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| Product | general secretion pathway protein B |
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| Protein accession | YP_001093140 |
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| Protein GI | 127511943 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00086545 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATCC TTCTCGATGC GGTGACCCGC GCGAAACAGC AAGATCAACA GCTAGACCCT
GTGATCACCC CAAGGGCCCA GTATGAGGCG ATGCAGCCCA AGTGGCCTCT GGTCGTCAAA
TTAGGCTTGT TAGGTACTGG CCTTGGCGGA GCCATCGCCC TTGCCTGGGT GCTCAGTGGG
CAGGGAGAGC TAGGCGCGCA AAAGCAGGCC GCATCAGTAT CTAACGTATC TAGCATATCT
AGCCAACAAA CCTCAGCGAT GCAGACACAA GCCCTGCCCC AGCAACAGCC CCAGCAACAG
CGAGTGGCTG AACAGCCGAC TGCCCAGCCT TCTCTTGAGC AGAATCCTCT GACAGGCATC
AAGCTTGCGG GGAAGGTTGC CCTGCCATTG CCGGTGGAGC GCCCCAGTGC TCAAGCCCGG
ACGAGTGAAC CCATGATGGC ATCTACCACT CAGCCAAGGC GTCAGCAGGC CGCGCAAAGC
CGTGTAAACC AAAGCCGTGC AAATCAAAGC AGCGTAAACA CCAGCGCCAC AAGTAATCAG
GGCTATGTAA ACGACCTGGG CGCAGATGAG CCGATCATCT TAGGCGCCAA CGCCAACGAG
CGTGGGCGAG AGCTGCTCAG CTCTCTCAAG GCGCAGGTGG ACGAGGCGGC GGCCGATGTC
GGCCTGGACG CTGCTTACGT TGAGGAGCAG CGCGCAAATC AGGGATTGGA GCAGGCTTTC
GACCAAGCAA GCGAGCAACA AGCAGAGCCA GTAGCTGAGC AGCGCCCGGT AGTTAAGGAT
ACCAGCAAGC TGGTAGCAGC CTTCGAGGCG GCGCTCAAGG AGGTGGAGAA GGAGAACGCC
GTCGCCACAC CCGTGACTCA GCCTAAGCTT GATCCTATTC CGGCGGCCCA GCCCGACGAG
CTGCCCAAGT ATGGCCAGCT ACCTGCTGGC ATTCAGTTGC AGGTACCCGA GTTTAATATT
CTGGCCCATG TCTATGCCAA CGATCCAAAG AACCGCTGGC TGAATGTGGA TGGCGCGGAG
CTGCAACAGG GCGACATGAT TGGTGGCAAG CTGAAGATTG TCGAGATACG CCCGAGGGAT
GTGGTGTTAG AGGTGGCCGG TACCGAGTTT AAGGTGCCCG CTATCTAG
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| Protein sequence | MSILLDAVTR AKQQDQQLDP VITPRAQYEA MQPKWPLVVK LGLLGTGLGG AIALAWVLSG
QGELGAQKQA ASVSNVSSIS SQQTSAMQTQ ALPQQQPQQQ RVAEQPTAQP SLEQNPLTGI
KLAGKVALPL PVERPSAQAR TSEPMMASTT QPRRQQAAQS RVNQSRANQS SVNTSATSNQ
GYVNDLGADE PIILGANANE RGRELLSSLK AQVDEAAADV GLDAAYVEEQ RANQGLEQAF
DQASEQQAEP VAEQRPVVKD TSKLVAAFEA ALKEVEKENA VATPVTQPKL DPIPAAQPDE
LPKYGQLPAG IQLQVPEFNI LAHVYANDPK NRWLNVDGAE LQQGDMIGGK LKIVEIRPRD
VVLEVAGTEF KVPAI
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