Gene Shew_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0994 
Symbol 
ID4922267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1150865 
End bp1151482 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content54% 
IMG OID640162526 
ProductKfrAs 
Protein accessionYP_001093124 
Protein GI127511927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0971877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AGCCAGAGAT TAGGGAGAGA ATTGTTGTTG CTGCCAGTGC GCTGGCGGCA 
GAAGGCATTG ACAGCCCTAC CAATGAGCAG GTGCGCGAGC GTATGGGTGG CGGTTCGCTT
TCTCATATAT CGCCTGTTAT GCGCGAATGG AGGGAGTCAA GAAAGGCAGA AGTTGTTGCA
GCCTTGGAGA TGCCTGCTGA ATTGAGGAAG GCTATTGAGT CCTCTGTGGG GCAAGTGTGG
ACTGCAGCCA GCAAGCTGGC ATCTGCCCAG GTTGAGACCG TGCGGCAGGA AGCTGACGCC
GCCATCGAGG CCGCCACCGG TGAGCGGGAT GAGGCGTTGG CAGAGGTTAG CCGTCTGGAA
GAGCGAATTG CTGAGCTGCA AAAAGCCGTG ACTGAAAAAG AGCAAGCTGT CAGTCAGGCT
CGCGAAGAGC TGGAAAGAGA TCGCGCTCAA AGCTCCAAGT TGATTAGCGA TAATGCCGCC
CTTGTCGCTC GTGTGGATGA CAGGGATGAA CAGATCAAAG GGCTTAAGGC CGAGTGGAAA
GAGTCGCGTG ATGACAATAA GGCTCTGCAA AATGAGCTTG TTGAGATAGC GCGTGATTCT
GGCAAGGGTA AGCGGTAA
 
Protein sequence
MKIKPEIRER IVVAASALAA EGIDSPTNEQ VRERMGGGSL SHISPVMREW RESRKAEVVA 
ALEMPAELRK AIESSVGQVW TAASKLASAQ VETVRQEADA AIEAATGERD EALAEVSRLE
ERIAELQKAV TEKEQAVSQA REELERDRAQ SSKLISDNAA LVARVDDRDE QIKGLKAEWK
ESRDDNKALQ NELVEIARDS GKGKR