Gene Shew_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0989 
Symbol 
ID4923532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1144881 
End bp1146173 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content47% 
IMG OID640162521 
ProductMobA/MobL protein 
Protein accessionYP_001093119 
Protein GI127511922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA TGCTATTTAA CAATCAGGGA TTAAGCAGAG CTGAGCTATG GAATATGAGC 
GAGCTATCAA ATCCAAGGAA AAATTCTCGT GTTGCACGAG AGACCATTGT CGCCCTTCCA
CATGAGCTGA ATTTGGATAG CTATAAATCC ATTTTAACAA GATATGCCAA TGCAATAGTT
GAACGATATG GCGTTGCGGT TGATGTGGCC ATTCATGCAC CAGGTAGAGA TGGCGACCAT
AGAAACTTTC ATGCTCACGT CTACTGCACC ACTCAAGTAA TAGAAGATGG AAAACTTGGA
AGGAAGGCAG AGATTGAGTG GAGTGATGCG AATCTGAAAA AGGCTGGAAT ACCAAAAGGA
AAAGCACAGC TTTTGGCCGT TAAGCAGCTA TGGGAAAAGT GTGTAAATCA GGAGTTTTAC
AGGCTCGGAA TGGACGAGCG AATAGATCAC AAGTTTGAAA TTAAGGGAGA CAAAATACCT
CAAGTTCACG TGGGGCCGCA TGGAACCAAG CTGGCTCGAC ATGGGAAAGG CCACGAGTCA
GACGAGTGGC AAATTAACCA GGCGATCATC GCCTACAACA ATGTTGTTTC ATTACAACAA
AAGAGGACTG AAAAAATGCA AAACCAATTA CAAACCGAAA TCCAAAGTAA CACCTCGACA
CCTCAAAAAA CCGCGACCGC CTACGGTGGT CTTGCAGCCT CTCAGGAGGC GGCTGAGGAA
GCTCTGAAGC AGGTCAAACA GCGAACCCAG GAACAGCAAA AGAATGAATC GGAACAGATA
GAGGCTGAGC GGTGGAAGCC AGCACAGATA GACCCCAACA AGGGCAGTGT TATCAATATG
TTTCAACAGG ATTCCCAGGG CGTTTATCGA TGGACTAAGG GGCGAAATGA AGGTGCGGAA
GCATTCCGCG ATACGGGAAA AGCAATTCAC AGTCAGACTA CCAATTCATG GGCGCTGGCT
GCCGAACTGG AGCTTGCAAA AGCCAAAGTT GATGCCGGTG ACTGGAAGGA GATCCGCACT
TTTGGCAGTG AGGAATATCG TCGTGCGGTG TGGATACAGG GACAAACGAT GGGAATACAG
GTTGAGGGTT ACAAGCCCAC GAAAGAAGAG CTTGCCAGAT ACGGCCAAGC ACCTGCTCAA
GGGTTGGCCG GTGATCAAAA ATCAGCAGCA GAAGCTACCC AAAACCGCTT TCAAACAGAC
CAGAAATTTC AGAACAAATT CGAGAAAAAT TCCGGCACGG CCAGCACGCC GGATAACTCC
AACTCTAGCC CATCACGTAG TCCCAAAATG TAA
 
Protein sequence
MATMLFNNQG LSRAELWNMS ELSNPRKNSR VARETIVALP HELNLDSYKS ILTRYANAIV 
ERYGVAVDVA IHAPGRDGDH RNFHAHVYCT TQVIEDGKLG RKAEIEWSDA NLKKAGIPKG
KAQLLAVKQL WEKCVNQEFY RLGMDERIDH KFEIKGDKIP QVHVGPHGTK LARHGKGHES
DEWQINQAII AYNNVVSLQQ KRTEKMQNQL QTEIQSNTST PQKTATAYGG LAASQEAAEE
ALKQVKQRTQ EQQKNESEQI EAERWKPAQI DPNKGSVINM FQQDSQGVYR WTKGRNEGAE
AFRDTGKAIH SQTTNSWALA AELELAKAKV DAGDWKEIRT FGSEEYRRAV WIQGQTMGIQ
VEGYKPTKEE LARYGQAPAQ GLAGDQKSAA EATQNRFQTD QKFQNKFEKN SGTASTPDNS
NSSPSRSPKM