| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0985 |
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| Symbol | |
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| ID | 4920813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1136261 |
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| End bp | 1138042 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640162517 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001093115 |
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| Protein GI | 127511918 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAATA GGATGAATGC AATGACAATA ATCAGACTTA TTTTTGTGGC AGTGTTTTTG
TTTGGTTGCA GTTCAAGCCC AAGGGCTCCT AGTGGTGGTG TGGTTGATGA GTTGACGCAG
AAACATATGG AAGATCGCCG TTGGCGTTCA GCTGACGAGC TAAAAAGAGA TTACATTAAA
CTTGCATCAG AATCTTCTCT TCCGATTCAG GAAGCGCTTG TCAAAGTGGT AGGAACGGAT
ACCGGCAATG CTATTCAAAG TATTGCAGAT AAAATTTATC TTATCGAAAA CGCCAAATAT
ACGGTTGACC TGACTTACTA TATTTTTTCC ACAGATATAG TGGGGGAGGC GGTTTTAGGC
GCTTTATGTA ATGCGGTAAA AAGAGGCGTT GATGTTCGCA TTATGGTTGA CAGCTTAGGT
TCATTTAGCT TCGTACATAG TGAATTAAAA GGACTTAAAG AGTGCGAGAA TGAAGCCGGA
TATTTAAAGA ATCGCCAAGG AGAAATCACT AACAGTAGAG CTAGAGTTCA AGCCGTCGTT
TTCAATGCGT TGACTGAGCT GGCCTCTGAT AGTAATCGCC GATCTCATGA CAAACTTTTA
GTTGTTGATG GCGCTTACCC GGAAAATGCA TTTGTTATGA CAGGTGGACG TAATATTTCG
ACTCATTATT ATGCCCTAGA TGAAATCGGT GAATTTGACC CTACAGCGTT CAAAGACATT
GAGATAATCA TTCGCCCCTT ACCGAATGCT TCAGCGACAA CTTCTGCTGC ACAACTGGCT
GAATATTACT ATTCAGTGCT ATTTTCTAAA CCTGGAAATA AATTCATAAC CGCAGTACTA
GATTATGAAG GTGTGATGGA AAAACACCAA GAAAAGTTAA TGGAATTAAA ACAAAAACAG
GGGTTTAAGC AGGCTTATCA ACGAGCAGCT GAGCATACTC AGCAAGGTTT TTCCTCAACA
AAGACTCGTT TAGCACATGA ACTTGATAAT TTAATCAACG ACAATTTGGT GTCAAATTAC
AGCTCAAACA AGCTTAAAAA TGCGAATTCC ATTAGTGGGA TATTGGGGCG CGTTGGTTTT
GAAAATTATG ATTTGAAAAA AGTGAGAATA GTCTCACCAT ACCTGTTTCT TCAATCTGAT
CTGTTGAAGG ATGAAGCGCT GATCGATGAA AATGTAAATG TGACGCTTGA GTGGCTAAAC
AAGGACCCAG ATCGCACGAT CGAAATCATC ACTAACTCAG TATTGACTAG TGATAATTTT
TCTACTCAGG CAGTGATTGA CATGCATACC GCACCGATAT TATTGATGAG TCCCGAACAA
CGAGAGCAAT GGCTAGATAG TGATCTAGAA GTGAATGAAG AAAATCTAGA ATTTACTTCT
TCGGAAACTT GGAAAAAGTT AGTGAACCAT CCCCGAATTC TTTTCTATCA GCTCGGTAAG
GATGATGCCG TTCCTCTAGG GGGGGATCAA TATTACGGCA AGTTGCATGC TAAGTTTGTT
ATTGCTGACG ATAAAGCCTT TGTAGGAACG ACTAACTTGG ATTTTCGCTC ACTTATTTAT
AACAATGAAA TGGGCTTTTT TCTGTTTAAT GGTGTAGTCA TAAAGGAGCT TAACGATCAA
TTTGAGCTGT TGAAATCTCA ATCGACTAGG TGGGGTAGCG ACGAATGGCT AAGTATGAGG
CATAAGGTGC GAGAGAGTGG CGGGTTAAAA GGGATGACAA CGAAAAAACA GCGCCTAATT
TATAAAACTT TGGAAAATAC CGGGCTGATA TATCAATTTT AG
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| Protein sequence | MGNRMNAMTI IRLIFVAVFL FGCSSSPRAP SGGVVDELTQ KHMEDRRWRS ADELKRDYIK
LASESSLPIQ EALVKVVGTD TGNAIQSIAD KIYLIENAKY TVDLTYYIFS TDIVGEAVLG
ALCNAVKRGV DVRIMVDSLG SFSFVHSELK GLKECENEAG YLKNRQGEIT NSRARVQAVV
FNALTELASD SNRRSHDKLL VVDGAYPENA FVMTGGRNIS THYYALDEIG EFDPTAFKDI
EIIIRPLPNA SATTSAAQLA EYYYSVLFSK PGNKFITAVL DYEGVMEKHQ EKLMELKQKQ
GFKQAYQRAA EHTQQGFSST KTRLAHELDN LINDNLVSNY SSNKLKNANS ISGILGRVGF
ENYDLKKVRI VSPYLFLQSD LLKDEALIDE NVNVTLEWLN KDPDRTIEII TNSVLTSDNF
STQAVIDMHT APILLMSPEQ REQWLDSDLE VNEENLEFTS SETWKKLVNH PRILFYQLGK
DDAVPLGGDQ YYGKLHAKFV IADDKAFVGT TNLDFRSLIY NNEMGFFLFN GVVIKELNDQ
FELLKSQSTR WGSDEWLSMR HKVRESGGLK GMTTKKQRLI YKTLENTGLI YQF
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