| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0984 |
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| Symbol | |
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| ID | 4920812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1134636 |
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| End bp | 1135988 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640162516 |
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| Product | beta-lactamase |
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| Protein accession | YP_001093114 |
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| Protein GI | 127511917 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TCAAAAGTTT TTCACAGTAC AGATTGAGAA ATGAGCGGCT ACACTCAGCA
AGAACTTTGT CGTTGTCTGC CGCGATGCTT ATCGGCATAC AGAGCCTAAT GCCTGCCATG
GCAGAGCAGC AGCCGGTCTC GACCAGTAAA TCCGTCACCG AGATCCGCGA GCTGTTTCAT
TTTTTCCATA CCCCCGCCAA TGTGGTGCAG ATACAAGTGG CTAACGATAA GACCCTGTAT
GCCTGGCAAA ATATGTCTGC CTTTCAGTAC ACCATGCAGA TAGAACGGGA TGGTCCTATC
AGTCTTTTGC CTGAGAAAAT TGACCCTAAA ATCGGTCAAC TCACATTCAC CCGTCCCGGC
AAAGCCCTAG AAACCGTGGC GCAGCATTTT GACAATAGCA ACATGGATGG CCTGCTGGTG
TTACATAAGG GCAATGTGGT TTATGAAAGC TATAAAACCA TGCGTCCATT CGATAAGCAC
CAATGGTTTT CTTGCAGTAA GGTGATCCCT GGCACTATGG TGGAATTGCT GGCATTGGAA
GGCAAAATCG ATATTAAAAA ACCTGTGAGT ACCTATGTTC CCGAGCTGAA AGGATCGGGC
TGGGATCAGG TGACGGTGGA AGAAACCTTG GACATGGCGA CAGGGCTGGA TTCAACCGAG
CATGAGGAGC CCAATGACGA TGCACGAGTG AACCCTATTC GTGGCTGGTA TAAATGGGCT
GTCAGTCTTG GCCTGTTTGA AGACAAGCAG AATCTTAATC AGAGCCCGTT CGATGTCTTA
CGTAACATGA AAAAGATCAA ACCCGGCCAT ACTGTATTTG AATATAACTC CATCAATACC
TTTGTTCTGG AACTGATCGT CAATCAGGTC ACCGGTAAAA CCCTCAACGA AGTCTTTGGT
GACAGGGTCT GGCGCAAGAT TGGTGCACAA AACGACGCCT TTGTCGGTGT CACCAAATAT
GGACTGGGTA ACGGTTGGGG ATTTGTGAAC ACCACCCTGC GTGATATGGG CCGCTTTGGC
ATGATCTTTA CCCCAAGCTG GAATAAGATC AGCAAGGAGC AGATCATCCC CGATAGCCTT
ATAACCTCAA TCCAGAAAGA TGGCAAACCC GAGATTTATC TAAAAGGATT TGTCGGTAAA
GAACTGCAGA AGTCCTTCCC GGATATCAAG GGGCTTAGCA ACCGTTATCA ATGGGACATC
GTCTTCCCCG ACGGCGATTT TTATAAAGGC GGCGTGGGCG GCCAAGGGCT CTATATTTCA
CCAAGCAATG ACACTGTGGT GGTCTGGTTC AGTACAGGTA AACAGCAAGA AGAGATCCTG
GCTCGCGAGA TAGTGAAGAG TCTGGGTGTA TAG
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| Protein sequence | MKQLKSFSQY RLRNERLHSA RTLSLSAAML IGIQSLMPAM AEQQPVSTSK SVTEIRELFH
FFHTPANVVQ IQVANDKTLY AWQNMSAFQY TMQIERDGPI SLLPEKIDPK IGQLTFTRPG
KALETVAQHF DNSNMDGLLV LHKGNVVYES YKTMRPFDKH QWFSCSKVIP GTMVELLALE
GKIDIKKPVS TYVPELKGSG WDQVTVEETL DMATGLDSTE HEEPNDDARV NPIRGWYKWA
VSLGLFEDKQ NLNQSPFDVL RNMKKIKPGH TVFEYNSINT FVLELIVNQV TGKTLNEVFG
DRVWRKIGAQ NDAFVGVTKY GLGNGWGFVN TTLRDMGRFG MIFTPSWNKI SKEQIIPDSL
ITSIQKDGKP EIYLKGFVGK ELQKSFPDIK GLSNRYQWDI VFPDGDFYKG GVGGQGLYIS
PSNDTVVVWF STGKQQEEIL AREIVKSLGV
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