| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0954 |
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| Symbol | |
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| ID | 4922126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1097847 |
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| End bp | 1098626 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162486 |
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| Product | ROK family protein |
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| Protein accession | YP_001093084 |
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| Protein GI | 127511887 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.198272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCC TGACCATAGA TATTGGCGCG ACTACCGCCC TGTTCGAAAT TGAGACTCAG
GGGCGCACCG AGCAATATAA AATCGCCACC GGCGAGCACT TCACCCTGGC CGACCTCAAC
CGCCACATCG TTGACATCGA AGCCGACTAT GGCCTGAGTG ACTATGCCTT AGGGGTGGCG
GTGCCAGGAC TGGTGAAGCA AGATACCTTG ATCGCTTGCA AGGTGGCACC TAAGCTCAAC
GGCCTGTCAC TGGCCAAGCT CAAGACTCAG GCCCGCTTTA GCCTGCTCCA CAACGATATC
GATGCCGGCA TGCTGGCGGT CTGTGACCCC AAAAATGCCT GCGAATTGCT GCTGATGAGC
GGCGCTGGCA TCGGCATGGC GATCGCCATC AAGGGCGAGC CGTTTCTCGG TGCAGGCGGC
GTAGCCGGCG AGCTGGGTCA TTGCCGGGTG ATGAGTGAAG GTGGCGAGTA CAGTCTGGAG
CAGCTGGCCA GTGGCGAGTC GATTCGCATT CGCGGCCTCA AGAGTCCCCA GGAGCTCTAC
CGCGCCGGTA GCTATCTGGG GATGGGCATC GCCTGGGCCA TCAATCTGCT GAATCCTAAT
CGTATCTGGC TTGCGGGCCC TATGATGAAT CAGCCGGACT ATTACAAGGG CTGCGTCGAG
TCCCTGAGAC AGCTGGCGCT GACGGCGCCG CTGGGGGATG TTAACATCGC CCGGGTCGAT
GATATGGAGA CCCTGGTGTG CCGCGGCCTC AAGGTACTGC TGGCCCAGCA CGCCGAGTGA
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| Protein sequence | MQSLTIDIGA TTALFEIETQ GRTEQYKIAT GEHFTLADLN RHIVDIEADY GLSDYALGVA
VPGLVKQDTL IACKVAPKLN GLSLAKLKTQ ARFSLLHNDI DAGMLAVCDP KNACELLLMS
GAGIGMAIAI KGEPFLGAGG VAGELGHCRV MSEGGEYSLE QLASGESIRI RGLKSPQELY
RAGSYLGMGI AWAINLLNPN RIWLAGPMMN QPDYYKGCVE SLRQLALTAP LGDVNIARVD
DMETLVCRGL KVLLAQHAE
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