Gene Shew_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0944 
Symbol 
ID4923585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1084464 
End bp1084976 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID640162476 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001093074 
Protein GI127511877 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAC GAGAGATACA GGCCCAGGAT TGGCCAGCCA TTTTACGCAT TCAAGACGAG 
TGCTATCCCG ACATCGAGCC CGAGTCCCTC GCTGCCCTGC AGAGTAAGGC CCGGCTCTCC
CCACAGACCT GTTTTGTGGT CACGCAAGAC GATGCCGTCA TAGGCTATTG CCTGGCGCAC
CCCTGGCAGC GCGACCTGCC GCCGAGTCTG GAGCAGGTGC TCGACGCAGC GCCCAAGCAG
GAGACCCTCT ACCTGCACGA TATCGCCTTT TCAGCCAAGG CTCGGGGCCT GGGGGCCGGC
GCGGCCGTGT TTAATCGCCT CATCGAACAG GCCAGAAACA AGGCGCTGGA TAGCATCTCG
CTAGTGGCCG TGGGCGGCGC CCACACATAT TGGCAACGTC TGGGCTTTAA ATCGCGTATA
ATCGACAAAT CCTTAGGCAG CTACCCGGAA GATGCCTGCT ACATGGTGTA TGCCATCGAC
GCAGATAACC CTGGCTATGC CTATCAGGAC TGA
 
Protein sequence
MQIREIQAQD WPAILRIQDE CYPDIEPESL AALQSKARLS PQTCFVVTQD DAVIGYCLAH 
PWQRDLPPSL EQVLDAAPKQ ETLYLHDIAF SAKARGLGAG AAVFNRLIEQ ARNKALDSIS
LVAVGGAHTY WQRLGFKSRI IDKSLGSYPE DACYMVYAID ADNPGYAYQD