| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0914 |
|---|
| Symbol | |
|---|
| ID | 4923748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1034216 |
|---|
| End bp | 1034821 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162446 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001093044 |
|---|
| Protein GI | 127511847 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.961366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC TTATCGTCAG TGCCAGTCAA CGTCCAGGTT CTCAAAGTGC CAGAGTCGCC
GGCTACCTTA GCGAACATGC TAACCAATTC AGTGAGATAC AACATATTGA GCTGTGCCGC
TATGACCTGC CCTTCTGGGA TGGCGACAGA AACGGCGCAG CGCTTAAGGC GAGCGACTGG
CAAAAGATAA GCCCGCTGGT AAAGCAAGCC GACGCTCTGG TTCTGATCAC CCCAGAATGG
GGCGGTATGG CCTCACCCAT GTTGAAAAAC TTTCTGCTAC TGTGTGACAA CCAGGACACG
GCCCACAAGC CCGCCCTCTT GGTCGCGGTT ACCAGCGGCA TCAGCGGCGC CTACCCTATC
GCCGAGTTAA AGATGAATGC CCTGAAGAAC AACAAGCTGG TGCCCATTCC CGATCATCTG
ATCATTCGTA ACGTGGAGCA GGTACTGGGA GAGGGTGAGA TAGATGCCAG AGAGCAGGGA
TTAAGAGCGC GCATCGACTA CAGCCTGCAC ATGCTCGGCC AGTATGCAGA TGCCCTCGGC
GTCATACGCC AGCGCCATAG GGATCAGCCC TACCCCAAAC AGCAGGAATA TGTATACGGC
ATGTAG
|
|---|
| Protein sequence | MKLLIVSASQ RPGSQSARVA GYLSEHANQF SEIQHIELCR YDLPFWDGDR NGAALKASDW
QKISPLVKQA DALVLITPEW GGMASPMLKN FLLLCDNQDT AHKPALLVAV TSGISGAYPI
AELKMNALKN NKLVPIPDHL IIRNVEQVLG EGEIDAREQG LRARIDYSLH MLGQYADALG
VIRQRHRDQP YPKQQEYVYG M
|
|---|
| |