Gene Shew_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0910 
Symbol 
ID4924104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1032482 
End bp1032799 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content54% 
IMG OID640162442 
Producthypothetical protein 
Protein accessionYP_001093040 
Protein GI127511843 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3615] Uncharacterized protein/domain, possibly involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTG TGCCTAAGGG ATATGTGAAG TGCAAGAAGA CACCTGTGTT TAGCGAGCAG 
GATATGCCCG CCATCTACCG TGAGCGGCAT TTTACCCGGC CCGGCGTGTA TGAGCAGATC
CATGTTATCC AAGGCGAGCT GATGTTTTTC GGCTACCTAG ACAAGTTGGG CGAGGTCAAT
CGCGAGGTGC GACTAGGGGC CAATGAGACG GCGATTTCTC ATCCCGGCTA CTGGCACAGC
ATCAAGCCGC TTACCCCTGA TACCCGTTTC GAAATTCATT TCTTCATCAA ACCCGAGGGG
CCGGTAGAGC AGGCCTAG
 
Protein sequence
MSFVPKGYVK CKKTPVFSEQ DMPAIYRERH FTRPGVYEQI HVIQGELMFF GYLDKLGEVN 
REVRLGANET AISHPGYWHS IKPLTPDTRF EIHFFIKPEG PVEQA