Gene Shew_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0856 
Symbol 
ID4920778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp978280 
End bp978816 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content51% 
IMG OID640162389 
Productphosphoglycerate mutase 
Protein accessionYP_001092987 
Protein GI127511790 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGAC TCATCAGCAT TGGACTTTTC GCCCTGGTGG CTTACCTGCC AATGGCGCAG 
GCCAATCCAG CAATCGCCAG CAAGACGGTA ATTCTGGTGC GTCATGCCGA AAAAGCCGAT
CAGGGACGCG ACCCTAGCTT GAATGACGCG GGCAAGTTGC GAGCACAGGC ATTGGTTGAA
AGCTTGGGCG ATACCCCACT CAGCCTGGCC ATATCCACAC AATTTAAGCG CACCCAGGAA
ACCTTAACGC CGCTTATTAC CGCCAGAGGA ATTCCTTTAG TTGTGATCGA CGCAGGCAAG
GATTTGGACA AACATATTGC GGCCATTGCC GACAAGGTCA TGGCGCAGCA GGGCAATGTG
ATCATCGCCG GCCACTCCAA TACTGTGCCA CTGATCATCA AGGCACTTCG AGGACCCGAA
ATACCTCAAT TGAGAGAGGA TGAATATGAC AATTTATTTA TCCTTTCCCT GCCCCAAGAT
GGCGCAAGTA GCCTGATAAA AACCCAATAT GGTGCAACTT CAGACAATAC CCAATAA
 
Protein sequence
MLRLISIGLF ALVAYLPMAQ ANPAIASKTV ILVRHAEKAD QGRDPSLNDA GKLRAQALVE 
SLGDTPLSLA ISTQFKRTQE TLTPLITARG IPLVVIDAGK DLDKHIAAIA DKVMAQQGNV
IIAGHSNTVP LIIKALRGPE IPQLREDEYD NLFILSLPQD GASSLIKTQY GATSDNTQ