| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0839 |
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| Symbol | |
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| ID | 4922633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 961898 |
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| End bp | 962866 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162372 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001092970 |
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| Protein GI | 127511773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000151592 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAA CCAGATTGCT ACATTTTTGT ACACTGATTG CTTGTACACT CCTGCTGAGC
GCTTGCCAGC CTAAGCCCGA GGTGAGCAGC CTGGTCGCCG AACCCAGCTA TGACGCCAGC
CTCTCCCCCC AGGCCCGATA TCTGTTAGTC AGCACCACCA GCAACAACCT ACAGCTCTGG
GACCTCAGCA AGAAAACGCT TAAATATCAG TGGCTCCACG GTAAAGCGGG CGGCACGGCG
ATAGCCACGG CCCTGTCGGA CAACCTGAAA TATGCCGCCT CCCTCAGCCG CGACTCGGTG
GCCCTGTGGA ACATGGACGA CGGTCAACCC TTGGGATGGT GGTCCCTGCC CGCCAACGGT
CAGTGTCTGG CGCTGGCCGA TAACGGTACC CTGCTCATCG GCCTCACCGA CGGCAGCGTC
ATGTCGCTCA ATCACCAGAC AGATACCCTG ATCAAATTTC TCGGCCACAG CGAAAAGGTC
AACAGCGTCG CCCTGTCCGC CGACGGCCGC TGGGCGCTGT CGGGCGGCAA CGACAATAAA
GTCTTCCTCT GGCAGGCCAA CACGGGCCAG CCTTTGCACC AGTGGCAACT CCCCAGCCGG
GTATTAGAGG TGAGCCTGAG TCAAGATGCC AGCCTGGCGT TTGCCGCCGA CAGCACCAAC
AAGGCCGACA TCTGGCAGAC CCAGACAGGT AAACCTGTGT CGTCGCTTAA AATAAAACGC
CGCACAATGA ACTTTTCCAC CGCGCGCTTT ACCAAAGATA ATCAGACACT GCTAACGGGC
ACTCCCGCCA GAGAAGTGAG CGTTTGGCGG GTAGCCGATG GAAAAATGCG CGCCAACTGG
CAAGTTACCC GCACCGAGCG TGCCCAAATC AAGGGCGCCG TTGTATACTC TGTGGCTGAA
ACCATTAATG GGCAGATCAT CAGCTTTAGC AGCAATGGCT TGCTGGAGAC CTGGCCCAAG
CCCGATTGA
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| Protein sequence | MSRTRLLHFC TLIACTLLLS ACQPKPEVSS LVAEPSYDAS LSPQARYLLV STTSNNLQLW
DLSKKTLKYQ WLHGKAGGTA IATALSDNLK YAASLSRDSV ALWNMDDGQP LGWWSLPANG
QCLALADNGT LLIGLTDGSV MSLNHQTDTL IKFLGHSEKV NSVALSADGR WALSGGNDNK
VFLWQANTGQ PLHQWQLPSR VLEVSLSQDA SLAFAADSTN KADIWQTQTG KPVSSLKIKR
RTMNFSTARF TKDNQTLLTG TPAREVSVWR VADGKMRANW QVTRTERAQI KGAVVYSVAE
TINGQIISFS SNGLLETWPK PD
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