| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0838 |
|---|
| Symbol | |
|---|
| ID | 4922818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 961672 |
|---|
| End bp | 961884 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640162371 |
|---|
| Product | SlyX family protein |
|---|
| Protein accession | YP_001092969 |
|---|
| Protein GI | 127511772 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2900] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000331079 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCAAC TAGAACAACG AATCGAAGAT CTTGAGATGA AACTGGCTTT TCAGGATGAC
ACCATAGAGT CACTGAACCA GCAGGTGATC AGGCTCAATG ACCTGCTGGC GGACCAACAG
GAGAAGTTAC GCCTGCTCAC CAGCAAGCTC TCCCAGGTCG AACCCAGCAA CATCGCCAGT
CAGGCGGAAG AGACGCCACC ACCTCACTAT TAA
|
|---|
| Protein sequence | MVQLEQRIED LEMKLAFQDD TIESLNQQVI RLNDLLADQQ EKLRLLTSKL SQVEPSNIAS
QAEETPPPHY
|
|---|
| |