| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0822 |
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| Symbol | |
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| ID | 4923424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 945361 |
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| End bp | 945954 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162355 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001092953 |
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| Protein GI | 127511756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAT CAATCGTTTC GTTAATCGCC GCCACCGGAT TACTCCTGGG CTCACCCGGC
CCTGCGCCGC TGGCACTGGC CGCCACTGGC GCCACCTTTG GCATAAGACG CGGCGCCCCC
TTCCTGGCGG GCATACTCCT TGGGCTCTCG GTGGCCATCA TAGGCGCCAG CATTGGGCTC
GCCGCCCTGT TTAGCCGCTT TCCCGACCTC AGGCTCACCT GTCAACTGCT CGGCGCCGCC
TATATCGCCT TCATCGCCTA TAAGATTGCC AGCGCCCCCT GCACCCAGTT AGATGACGCG
CAGCGAGCGC CAAGCTTCAA AGATGGCTTT ATCCTCAACC TGCTTAATCC CAAGGCCTAT
GCCGCCTTCC TCGCCATCTT CTCCCAGTTT TTACTGCCAC TGGAGAACAC GGCCCTGGGT
TATCTGGCCA CTGGGATCTG CGCCTTGCTG GTCGCGACTC TGGTAGATAG CCTCTGGCTG
ATCTTCGGCG GCCTGCTACG CCCGCTATTT TCCAGGCCAA AGGCCGCAAG GGCGCTGCGC
ATCTTCTTCG CCGTCGCCAT GCTAGTCGCG GTCGGTTATG CCTTGCTGGC CTAG
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| Protein sequence | MLESIVSLIA ATGLLLGSPG PAPLALAATG ATFGIRRGAP FLAGILLGLS VAIIGASIGL
AALFSRFPDL RLTCQLLGAA YIAFIAYKIA SAPCTQLDDA QRAPSFKDGF ILNLLNPKAY
AAFLAIFSQF LLPLENTALG YLATGICALL VATLVDSLWL IFGGLLRPLF SRPKAARALR
IFFAVAMLVA VGYALLA
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