| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0800 |
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| Symbol | |
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| ID | 4921002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 912248 |
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| End bp | 913489 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162333 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001092931 |
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| Protein GI | 127511734 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAG TGGATTTAGT GGTGATTGGT GGCGGCATAA CTGGGGTGGG CATCGCCCAG
TGTGTCCAGG CCGCCGGCTA CTCTGTGGTG CTGCTTGAGA AGGATAATCT GGGCGAGAAG
ACCTCGTCGA ACTCCAGTAA GTTGATCCAT GGCGGCCTGC GTTACTTAGA GTCGGGTCAA
CTTGGCCTGG TGCGCCAATC CCTGAGTGAG CGCAAGGCGC TGCTGACACT GGCGCCCGAG
CTGGTAAAGC CAGTGCCTTT CTATATCCCT ATCTATCGTG GCAGTCAGCG CGGCCCGCTG
GCCATTCGCG CCGGGCTGAG CCTGTATGCC TTGCTGAGCG AGCTGGATCC CCTGGGCCAG
TTTCAGTCTG TGCCGGCCAG TCGCTGGAGT GAGCTTGCTG GACTCAAGCT CAAGGGGCTG
CGCGCCGTGT TTCGTTACTG GGACGCCCAG ACCGACGATG GCGCATTGAC CCGAGCAGTG
GCCCAGAGCG CCAGAGCGCT GGGGGCAGAG CTGCTTACCC AGGTCAGCTT GGAGCAGATA
GAGCACAGGC CAGACTCCTG CATCGTCAGC TTTAGCCATA AGGGAGAGAC GCGGCGCCTC
AGTAGTCGCT GCGTCATCAA TGCCACAGGG CCCTGGGTCA ATCAGACGCT CGAGCGGGTC
ACCCCTAAGG TGGAAGTATC GCCGGTGGAG CTGGTGCAGG GGAGTCACCT GGTGCTGGAT
ATCCCAGCGC CCAGCGGCAT CTTCTACCTG GAGTCTATCT TCGATAAGCG GGTGGTTTTT
GTGATGCCCT GGCAGGGTAA GACAATGATA GGCACCACAG AGACGCCAAT CGATGCGGTG
GACGCGGCGG GCGTGACGCC GGCCGAGGAG GCCTATCTGC TGGGGATCTA CCGCCACTAC
TTCCCCCTGA GTGAGAATGA TGGCGCGCTC GAGGAGCGCA TCACAGGGCG ATACTGCGGC
GTGCGTGTGC TGCCCAAGCA GGGCGGCGAG GCGTTCGACC TGCCCAGGGA TACCATGATG
CTGTCGCGCG ATACCCATCC CAACCTGCTC ACCGTCTATG GCGGTAAGCT GACCACCTTC
AGGCACACGG CCAAGGAGGC ACTGGCCTGG GTCAAGAATC GCCGCGGCCC CAAGCCGATA
CGTGCCGATG TCGATAAGTT GCGCCTCACT CCCGTGACCG ATGAGGCGCC ATCAAGCGAA
TCGCCCACGG CGAAAGGTGA TTTTTCTCCC CAAAAAGGCT AA
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| Protein sequence | MQAVDLVVIG GGITGVGIAQ CVQAAGYSVV LLEKDNLGEK TSSNSSKLIH GGLRYLESGQ
LGLVRQSLSE RKALLTLAPE LVKPVPFYIP IYRGSQRGPL AIRAGLSLYA LLSELDPLGQ
FQSVPASRWS ELAGLKLKGL RAVFRYWDAQ TDDGALTRAV AQSARALGAE LLTQVSLEQI
EHRPDSCIVS FSHKGETRRL SSRCVINATG PWVNQTLERV TPKVEVSPVE LVQGSHLVLD
IPAPSGIFYL ESIFDKRVVF VMPWQGKTMI GTTETPIDAV DAAGVTPAEE AYLLGIYRHY
FPLSENDGAL EERITGRYCG VRVLPKQGGE AFDLPRDTMM LSRDTHPNLL TVYGGKLTTF
RHTAKEALAW VKNRRGPKPI RADVDKLRLT PVTDEAPSSE SPTAKGDFSP QKG
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