| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0780 |
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| Symbol | |
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| ID | 4923658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 891496 |
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| End bp | 892602 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162313 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_001092911 |
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| Protein GI | 127511714 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.543738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00363674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCGG GTCGTTCTAC GCTAAAGATT GGCGAGCTCG CAACTGGCCA AGATCTCGAG
CTGAATCTGT TTGAGTTTGC CCCTGAGGTG CTGACCGGGC CGAGTGTCTA TATACAGGCA
AACGTCCACG GCGCCGAGGT GCAGGGCAAT GCGGTGATCT ATCAGCTGAT GCAGGCCCTA
GAAAGCTGCG AGCTGCGCGG TAAGATCACC CTAGTGCCCC TGGCCAATCC GTTGGGGATC
AATCAAAAGA GTGGCGAGTT TACCCTAGGC CGGTTCGATC CCATTACCGG GGTGAACTGG
AACCGTGAAT ATCTCGACCA TAAGTTGGAT ATTGCTAGCT GGTATCAAGG CCATAAACAC
CTGAATGATG CCGAGCTGAT CGCCCATTTC AGGGCCTTGC TGGTCGAGCG TTGCTATAGC
CGTCTGCATG AGCCCTGGGG GATCACCACG GGCCATCGTC TGGCGGTGAG CCTACAGCAG
ATGGGCCATG AGGCGGATAT CGTGTTGGAT CTGCATACCG GCCCTAAGTC GTGCAAGCAC
CTCTATTGCC CCGAGTATGA CCAAGATGCC GCCAAGTACT TCTCTATTCC CTACACCCTG
CTGATCCCCA ACGAATTCGG CGGGGCCATG GATGAGTCTA TCTTCTGCCC CTGGTGGCAG
CTGAGTGAAT ACCTGGCCAC TCAGGGGCGC GAGATTGAGG TGCCCGTATC GGCCTTTACC
CTGGAGCTTG GTAGTCAGGA GAATGTCGAC CTGGCAGATG CCCTGGTTGA TGTCGAAGGG
ATCATGGCTT ATCTCAGCCT GCGCGGTGTA ATAAGTGAGC GGGTTGAGCC AGCTGAGATG
CCTCGCTACG CCTGTTATCT GAAAGACTAT AAGAAGTATC ACGCGCCGCA AGGCGGCTTG
GTGGAGTATA AGGCGAAGGT GGGGCAGCCA CTTTTGGCCG GTGAGCCGCT CGCCAACATC
TTGCGTGTCG ACAGATATGG CGAGGAGGAT GCGATAGTGC CTCTGAGTCT GCCTGTTGAC
TGCGTGCCCG TACTGCATTT TGCCTCGGCG TCTGTGTATC AAGGCACAGA GCTCTATAAG
GTGATGACTA AGGTGTTTGC GCTTTAG
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| Protein sequence | MKPGRSTLKI GELATGQDLE LNLFEFAPEV LTGPSVYIQA NVHGAEVQGN AVIYQLMQAL
ESCELRGKIT LVPLANPLGI NQKSGEFTLG RFDPITGVNW NREYLDHKLD IASWYQGHKH
LNDAELIAHF RALLVERCYS RLHEPWGITT GHRLAVSLQQ MGHEADIVLD LHTGPKSCKH
LYCPEYDQDA AKYFSIPYTL LIPNEFGGAM DESIFCPWWQ LSEYLATQGR EIEVPVSAFT
LELGSQENVD LADALVDVEG IMAYLSLRGV ISERVEPAEM PRYACYLKDY KKYHAPQGGL
VEYKAKVGQP LLAGEPLANI LRVDRYGEED AIVPLSLPVD CVPVLHFASA SVYQGTELYK
VMTKVFAL
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