| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0746 |
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| Symbol | |
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| ID | 4920624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 846833 |
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| End bp | 847777 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162279 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001092877 |
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| Protein GI | 127511680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTAG AATGCGCCGA TACCAGCCTT TGGCTCAGGG AAGCCGACCA TCCCGCCATT
ACCCTGCCGC GTTGGCAGCA ACAAGTTGAT CTACTTAATG AATTTTATCA GGCTCAGGCC
AGTGTGGTGC TGCAGTTTAT CGACGGCGAG TATCAGGTGG TCTGTAGTCG TCAGCACACG
GATCTTAATC TCTATGCCGG TACTCAGTTT CATGATGCCA GCCTCACCCA AGCCCTCAAG
AGCCACACCG CCTACGGCCT GCTGGATCTG ACCAAGAGCC AAGATCCCAA GAGTCACCTG
GCACGCTTTA ACAGCCTGCT GGCCCTGCCC CTCTACTGGT CAGACGGTCA ACCATTTGGC
GTCATGCTGA TCTGCGACAG CCAGCGCAGT AAACACTTTC AGCGACTCCT GCCGCTTATG
GAAAACGCCA AGGCGTTGAT CCAGGCGGAG CTCAAGCACC TGTTTTTGAT GCAGCAGATT
CAGATGATGT CGGTACAGGA CGATCTCACC TGCATGCTCA ACCCCTATGG CTTCAACCTG
ATGGCGCCAA GACAACTGAG CCTGAGTCGC CGCTTCGGCT CCCATGCAGG TATCGTCCTG
CTGCAGGACA TGACCTCCTA TAAGGGAGTG ATGGAACAGA GTCAGGGGCT GAGGCAGTTA
GCCCGGGTGA TACACCATAA TATGCGTGAC GCCGATGTCT CGGCCCGCAT CGAAGATGGC
CTGTTTGCCA TACTGGCCTT CGTCGACAGT CAGGCCAATC TCGAATCTCT CACCAAGCGA
TTGCTCAAGC AGATCGCCAA GGAGGAGATC AAGGCGGAGA TCGCCATAGG CGTAAGCTTC
TTCACCCCCA CCACACATCT TGCCATCGAG CCCATGGTGG AGGCGGCGAG ACAGAATCTA
CATGCCAACC GAGAGCTGAA ACAGCAAGGT GGCGTAAAGG CCTAG
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| Protein sequence | MLLECADTSL WLREADHPAI TLPRWQQQVD LLNEFYQAQA SVVLQFIDGE YQVVCSRQHT
DLNLYAGTQF HDASLTQALK SHTAYGLLDL TKSQDPKSHL ARFNSLLALP LYWSDGQPFG
VMLICDSQRS KHFQRLLPLM ENAKALIQAE LKHLFLMQQI QMMSVQDDLT CMLNPYGFNL
MAPRQLSLSR RFGSHAGIVL LQDMTSYKGV MEQSQGLRQL ARVIHHNMRD ADVSARIEDG
LFAILAFVDS QANLESLTKR LLKQIAKEEI KAEIAIGVSF FTPTTHLAIE PMVEAARQNL
HANRELKQQG GVKA
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