Gene Shew_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0733 
Symbol 
ID4920586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp834650 
End bp835405 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID640162266 
Producthypothetical protein 
Protein accessionYP_001092864 
Protein GI127511667 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTG CTAAGTCATT GGACACTGCT AGCTCACCCG CCTTCTGGCG CTATCATCTC 
TTGCTGCCCG CCGTCTGCTT CCTGCTGGCC GTCAGCCTGA TAGGGCTATT TCATCTGGAT
ATCGCCCTGG GTCAGTGGCT GTTTCGTCTC GAGGGCGGCG TCGATGGCTG GCCGCTACGC
AACGCCTGGG TCACGGAGAA TCTGATCCAT GTCGGCGGTC GTAACTTAGT GATCTTACTC
GGAGTCACCG TCCTCAGCCT GCTGGGACTG AGCTATAAGA AACCCGCCCT GGCCAGCTAT
CGCAGAGGCC TGGTGTTTCT CTTCATGAGT GTGCTGAGCG GCGTGCTGCT GGTGAGGCTG
GGCAAATCGT TCGTACACCT AGACTGCCCC TGGCATCTGA AGATCTTTGG TGGCCGCGCA
GATTATTTCT CGCTGTTCTC GGGTCAGTTT GATGCCAACT CACCGGGTCA GTGTTTCCCT
GCCGGTCACT CCAGCGGCGG CTATGCCTGG GTGGCACTCT ATTTCTTCGC CCTGGCCTAC
GCGCCGCGCT ATCGTTGGTT CGGCCTTGCT TTCGGTCTGC TGCTTGGGCT CACCTTCGGC
ATTGCCCAGC AGCTCAGGGG CGCCCACTTC ATCTCCCACG ATGTCTGGAC CCTCACCATC
TCCTGGTTCT CGGCGCTGAC CTGGTATTAC GCCCTCTTCC TGCGTCGCCA GCCAGAGCCC
GCAATTAGCC CGGCGCTGGA AACCGCCCGA GGCTAA
 
Protein sequence
MSIAKSLDTA SSPAFWRYHL LLPAVCFLLA VSLIGLFHLD IALGQWLFRL EGGVDGWPLR 
NAWVTENLIH VGGRNLVILL GVTVLSLLGL SYKKPALASY RRGLVFLFMS VLSGVLLVRL
GKSFVHLDCP WHLKIFGGRA DYFSLFSGQF DANSPGQCFP AGHSSGGYAW VALYFFALAY
APRYRWFGLA FGLLLGLTFG IAQQLRGAHF ISHDVWTLTI SWFSALTWYY ALFLRRQPEP
AISPALETAR G