| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0728 |
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| Symbol | |
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| ID | 4923291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 829023 |
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| End bp | 830051 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162261 |
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| Product | dihydroorotase |
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| Protein accession | YP_001092859 |
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| Protein GI | 127511662 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0874924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAT TAACCATTAC CCGACCCGAC GACTGGCATG TTCACCTACG CGATGGTGAC
GTGCTGACCG ATACCGTAAG AGACACTGGC CGCTACATGG GCCGCGCCAT CATCATGCCT
AATCTGGTGC CACCGGCCAC CAATGTCGAC TCGGCACTGG CCTACTATGA GCGCATCAAG
GCGGTCTGCA CCACCAACTT CGAGCCGCTG ATGGTGCTCT ACCTCACCGA CAACACCACG
GCCGAAGATA TCCGCGCCGC CAAGGCGTCG GGCAAGGTGG TGGCCGCCAA ACTCTACCCT
GCGGGCGCGA CCACTAACTC AGACTCGGGC GTCACTGATG TGAAGAACAT CTACCCCGTG
CTGGAGGCGA TGCAGGAAGT GGGCATGCTC TTCCTGGTAC ACGGCGAAGT GACAGATTCG
AGCATCGACA TCTTCGATCG CGAGGCCACC TTCATCAACA ATACCCTCAA GCAGGTGGTT
GCCGACTTCC CATCACTCAA GATAGTGCTG GAACACATCA CCACCAAAGA TGCGGTGGAT
TTCGTCATGG GCGCCTCCGA CAACGTGGCC GCCACCATCA CGGCCCATCA CCTGCTCTAC
AACCGTAACC ATATGCTGGC CGGTGGTATT CGTCCTCACT TCTACTGCCT GCCTATCCTG
AAGCGCAACA CCCATCAGCA GGCCCTGCTG GCGGCTGCGG CCAGCGGTAG CAAGAAGTTC
TTCCTGGGCA CAGATTCGGC GCCCCACGCC AAGGACCGTA AAGAGGCCGC CTGTGGCTGC
GCCGGTTCTT ACACCGCCCA CGCCGCCATC GAGCTCTACG CCGAGGCGTT CGAGTCGGTG
GGCGCTTTAG ACAAATTAGA GGCCTTCGCC AGCTTCAACG GCCCTGACTT CTACGGTCTG
CCACGCAACA CAGACAGCAT CACACTAGTG AAACGCAGCT GGGAGGTGCC CGCCACCTAT
CCGCTGGGTG ACACAGGCGT AGTGCCAATC CGCGCCGGCG AAACCATCGA CTGGCAGGTA
GAAGACTAA
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| Protein sequence | MTKLTITRPD DWHVHLRDGD VLTDTVRDTG RYMGRAIIMP NLVPPATNVD SALAYYERIK
AVCTTNFEPL MVLYLTDNTT AEDIRAAKAS GKVVAAKLYP AGATTNSDSG VTDVKNIYPV
LEAMQEVGML FLVHGEVTDS SIDIFDREAT FINNTLKQVV ADFPSLKIVL EHITTKDAVD
FVMGASDNVA ATITAHHLLY NRNHMLAGGI RPHFYCLPIL KRNTHQQALL AAAASGSKKF
FLGTDSAPHA KDRKEAACGC AGSYTAHAAI ELYAEAFESV GALDKLEAFA SFNGPDFYGL
PRNTDSITLV KRSWEVPATY PLGDTGVVPI RAGETIDWQV ED
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