| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0725 |
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| Symbol | |
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| ID | 4922780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 824767 |
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| End bp | 825963 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162258 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092856 |
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| Protein GI | 127511659 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACA TTAAACCAAT TTTTAGCAGT TTGCTCCGCA GTAAGAGTGG CCCGGTATTG
CTACTGGTGC AGATTATCCT GTCGGTGGCC ATAGTCGCCA ACGCCAGTTT CATCATCCAT
GAGCGTCTCG AGCTGATGCA GCGTGACTCT GGGATTAATG AAGAGGAGGT GTTGACCTTC
AGTGTGTTTA ACTTCGACCC CAGCATAGAT ATCGAGCAGC AGAACAAGAT AGATCAACAG
ATCCTGCGCG GTTTGCCTAA CGTGCAGGCG GCCACCTCTA CCAACATGTT GCCCCTGAGC
GGCAGTGGTT GGTCGAGTAC CCTCAACCTG GGACCAGATC CAGAGACGGC CAAGTCGACG
CCACAGTTTG CCATGTACCT GGGCACAGAG CATACCGTTA AGACGCTTGG GCTCAAGCTC
ATCGAGGGAC GCAACTTCTA CGCCGATGAG ATCAATAAGA GCGTCAACGA TCCCGGTAAG
CTGGCGATCA TCTCCAAGGC GTTTGGTGAG GCGGTATGGC CGGGTGAGTC GGCCATCGGC
AAGTTGCTCT ATATCGATGA CGAGCAGCTT GAGGTGATCG GCGTGGTGGA GAAGTTTCAG
GGCGCCTGGG TTGACAGCGA TGAGCTTGAA TACAGTGTGA TCCACAACGT CGATTTTGCG
GGTTATAGCT ATATGGTGCG TGCGGAGCCC GGCCAGCATG AGGCGTTGCA AGATGCCATC
ACCAAGGCCT TGATGAAGGA GAATCCTAAT CGGGTGATCG ATGACTTCCA GTCTGTCGCC
GAGGTGAAGA AGCGCTCCTA CCGAGATCAC GAGCTGATGA TAACCGTGCT CTCCATGATG
GTGGTCCTGC TGCTGTTGAT CACTAGCCTA GGCCTGACCG GTATGGTGAT GTTCAACATC
CAGCGCCGCA CCAAGCAGAT AGGTACTCGC CGCGCCCTGG GCGCGACCAA GGGGGATATC
CTCAGCCTCT TCCTGGTGGA GAACTACCTT ATCTGTCTCT CAGGTGGCGT ATTAGGGGCC
AGCCTGGCGG TGCTGCTGGG GCAGCAGCTG ATGAAGTACT ATGATCTGCC GCAGCTCAAC
CTGCTCTACC CGCTCATGAC GGTAGTAGGC ATGATGCTGG TGACCACAGT GGCCGTGGTA
CTGCCGGCGC GCAAGGCGGC GAACATCTCG CCGGCCATGG CGACCCGCAG CGTCTAA
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| Protein sequence | MLNIKPIFSS LLRSKSGPVL LLVQIILSVA IVANASFIIH ERLELMQRDS GINEEEVLTF
SVFNFDPSID IEQQNKIDQQ ILRGLPNVQA ATSTNMLPLS GSGWSSTLNL GPDPETAKST
PQFAMYLGTE HTVKTLGLKL IEGRNFYADE INKSVNDPGK LAIISKAFGE AVWPGESAIG
KLLYIDDEQL EVIGVVEKFQ GAWVDSDELE YSVIHNVDFA GYSYMVRAEP GQHEALQDAI
TKALMKENPN RVIDDFQSVA EVKKRSYRDH ELMITVLSMM VVLLLLITSL GLTGMVMFNI
QRRTKQIGTR RALGATKGDI LSLFLVENYL ICLSGGVLGA SLAVLLGQQL MKYYDLPQLN
LLYPLMTVVG MMLVTTVAVV LPARKAANIS PAMATRSV
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