| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0699 |
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| Symbol | |
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| ID | 4923880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 793188 |
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| End bp | 794663 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162232 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_001092830 |
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| Protein GI | 127511633 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACC TTAAGCCCCA CTTTGGCAAC CTTGCCAGTA CCTTAGCAAG CTTAGTTATA
TGTTTGGCCG CACTGTTTAG CCCGGCTGTC TTTGCCAGCA GTGGCGAGGC CCATGGGCAG
CTGTTAGATC TCACCGCCAC CGGCGCCGGC TATGTCGCCG TGGTGATCTT CGTCCTGGCC
TATCTGCTGG TGATGGGTGA AGAGGTGCTG CATCTGCGCA AATCCAAGCC AGTGCTGGTC
GCCGCCGGTT TGATCTGGGG CATCATAGGT TACATCTATG TGCAGCATGG CATGTCGGAA
CTCTCCGAGA CCGCCTTCAA GCACAACCTA TTGGAGTATG CCGAGCTGCT GCTCTTCCTG
CTGGTTGCCA TGACCTATAT CAACGCCATG GAGGAGCGCA ACCTGTTTGA CGCCCTGCGG
GCCTGGATGG TGGGCAAGGG CTTTAGTCAG CGCACCGTCT TCTGGCTCAC CGGCTTCATG
GCCTTCTTTA TCTCCCCCAT CGCCGATAAC CTGACCACGG CCCTGTTGAT GTGCGCCGTA
GTGATGAAGG TGGGCGGCGA CAACAAGAAG TTTATCGCCC TGGCCTGTAT CAACATAGTG
GTGGCGGCCA ACGCCGGCGG TGCCTTCAGC CCCTTCGGCG ATATCACCAC CCTGATGGTG
TGGCAAAAAG GCGTGGTGCA TTTCGAGCAG TTTGTCGATC TCTTCATCCC ATCCCTGGTT
AACTTCCTGG TGCCGGCGGC GATTATGAGC GCCTTCATCG TCAATCAGGT ACAAGAAGCG
GAAGAGGAGA AGGTGATGAT GAAGCGCGGC GCCAGACGCA TAGTCGGCCT GTTCTTGCTC
ACCATAGCCA CCGCCGTCTG CACCCACAGC GTGCTGGGTC TACCACCCGT GCTGGGCATG
ATGACGGGCC TCGGCTTCCT GCAGTTCTTC GGCTTCTACC TGCGTAAGAG CTTCCCCAAG
GCGGTGCTCA AGGCCAAAGA GCAGGCGGAG CGCGACAACA ACCTCAAGCG CCTGGAGCAG
CTGGGTAACG TGGTGCCCTT CGATGTGTTC AGCCGCATCG CCCGCGCCGA GTGGGATACC
CTGCTCTTCT TCTACGGTGT GGTGCTCTGT GTCGGTGGCC TGGGCTTCAT GGGCTACCTC
AGCCTGGTGT CCGAGGCCAT GTATACCCAT TGGGACGTGA CCTATGCGAA CATCGCCGTG
GGTGTACTCT CCTCAATCGT GGATAACATC CCTGTAATGT TTGCCGTGCT GACCATGAAC
CCTGAGATGG CCCTTGGCCA ATGGCTGTTG GTGACCCTGA CCGCAGGGGT GGGCGGTAGC
CTGCTCTCTA TCGGCAGCGC CGCCGGTGTG GCCCTGATGG GACAGGCCCG CGGCATCTAC
ACCTTCGCCA GCCACCTCAA GTGGACGCCC GTGATCGCCC TGGGCTACAT CGCCAGTATC
CTGGTGCATC TCTGGCTCAA CAGCTCACTG TTCTAA
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| Protein sequence | MRNLKPHFGN LASTLASLVI CLAALFSPAV FASSGEAHGQ LLDLTATGAG YVAVVIFVLA
YLLVMGEEVL HLRKSKPVLV AAGLIWGIIG YIYVQHGMSE LSETAFKHNL LEYAELLLFL
LVAMTYINAM EERNLFDALR AWMVGKGFSQ RTVFWLTGFM AFFISPIADN LTTALLMCAV
VMKVGGDNKK FIALACINIV VAANAGGAFS PFGDITTLMV WQKGVVHFEQ FVDLFIPSLV
NFLVPAAIMS AFIVNQVQEA EEEKVMMKRG ARRIVGLFLL TIATAVCTHS VLGLPPVLGM
MTGLGFLQFF GFYLRKSFPK AVLKAKEQAE RDNNLKRLEQ LGNVVPFDVF SRIARAEWDT
LLFFYGVVLC VGGLGFMGYL SLVSEAMYTH WDVTYANIAV GVLSSIVDNI PVMFAVLTMN
PEMALGQWLL VTLTAGVGGS LLSIGSAAGV ALMGQARGIY TFASHLKWTP VIALGYIASI
LVHLWLNSSL F
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