| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0687 |
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| Symbol | |
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| ID | 4923335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 781002 |
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| End bp | 781661 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162220 |
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| Product | heat shock protein DnaJ domain-containing protein |
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| Protein accession | YP_001092818 |
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| Protein GI | 127511621 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.365833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTTG CCAAATCGAC CCCGACAGCC GCCAGGCTGC AAGACGCCTC ATCGTCCAGC
CAATGCTTCG CCATCAAAGG CGATAACCCG CTCATCTGGC CGCTCCTCAC CCTGCTGCAG
CGCAGCAACC GTAGCTGGAA GGTGCATCAC CTGGCCGCCG CCCTACAAGA GAAAGGCCTG
ATGCGCGCGC TGGACACAGA CCCACAGAAG GCCCTGTTTA AGCAGAACTT CCTGCTGATG
AACGCCCTGT TCGAGTTACA GGCCATGCTA CTGCCCGGCA GCTACCTGCA GGTCAGGGCG
ATGGAGATAC AGATCTTTCG CATCCCTCCC AGCAATTTAG ATAGCCAGCT GAGTCAGGAT
GACGCCCTAA GAAGCTACTA TCAGGACTGG CAGCACTACG ACACCTGCCC GGATATCATT
CAGGAGATGC TGGAATCCTT CTGGCAGCGC TATGAGGACT ATATCGGCAC CAGCCACAAC
GCCCTGCCCA AGCGTCAGGC GCTTGAGGTG TTCGAGCTGC CCCAAGACGC CAGCGACAGA
GAGATACGCA AGCAGTGGCG AAAATTGGCC CTGCAATGGC ACCCCGACCG TGACGGCGGC
GACGCCACTC AATTTAAGCG GGTCTGCGAG GCCTGGCAGA CACTGAGAGA ATCCCGCTAG
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| Protein sequence | MLLAKSTPTA ARLQDASSSS QCFAIKGDNP LIWPLLTLLQ RSNRSWKVHH LAAALQEKGL
MRALDTDPQK ALFKQNFLLM NALFELQAML LPGSYLQVRA MEIQIFRIPP SNLDSQLSQD
DALRSYYQDW QHYDTCPDII QEMLESFWQR YEDYIGTSHN ALPKRQALEV FELPQDASDR
EIRKQWRKLA LQWHPDRDGG DATQFKRVCE AWQTLRESR
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