| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0676 |
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| Symbol | |
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| ID | 4921044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 769906 |
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| End bp | 771054 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162209 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001092807 |
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| Protein GI | 127511610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3489] Predicted periplasmic lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0244175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT TTAAATATGG CGCGATCGCA TTGACACTCA TTTCTGGTTT GGCGGCCTGT
GGTGGTTCGG GCAGCGATGA GCCTGAGGTG GTGGTGCCCG AGACTGGTTT TAGTTTCGAT
GCCGACGCCC TGATCGTCAA CCTGAGCGAC GAGGTGATCG TCAAGGGTTA CAGCACATTA
GCGGATCGCG GCGAGGCGCT GCTGCAGGCC ACCCAGACCC TGGTTGCCAC TCCTACCCAG
GCAAATCTTG AGGCGGCGCA GTCGGCCTGG AAGGCGGCCC GTCAGCCCTG GGAGCAGGGC
GAGTCACACA TCTTCGGCCC GGTGGACTCT CTGGGGATCG ACCCACACCT GGATAGCTGG
CCGCTGAACA CCACAGATCT TAAGACGGTC TTAATCAACA GCAGCGGCTT CGATGCCGAG
ACCATCAAGG GCTGGAACGA TGACGTGCAG GGTTTCCACA CCATGGAGTT TCTGCTGTTC
GGTGACGGCA TGGACGACAA CGTCAAGCAG ATCGACGAGT TGACCGCCAA TGAGCGCGAC
TACCTCATGG GACTGGCTGA GGTGTTTCGC GACTACACCA AGCAGCTGGC CGATGCCTGG
CTGGTAAGCC ATGACGGTCA GAGTGGCAAG GCCTATGGCG AGTTGCTGAA GTCGCCGGGC
GTCGATGGCA ATACCTTCTA CAGCTCGCAG GTGGGCGTGT TGGAGGAGCT GATCAAGGGG
ATGATCGGCA TAGTCGATGA GGTGGGCAAC GGTAAGATCG CCGACCCCTT CGGCGGCTCG
CTGGCCAGCG CGGACACCTC TAAGGTGGAA TCGCAATACT CTTGGAACTC GCTGACCGAC
TTTAGCGATA ACATCATAGG GGTGCGCAAC GTCTATCAGG GCGAGTTCAC CGGCGAGGCC
GACAAGCAGG GGATCATCGA CTTCGTGCGC GCCGCGGACA GCGAGTTGGC TAGCCGGATC
GCCGCAGAGA TAGACGCTGC AATCTTGCAG ATCCACGCCA TCGAAGGCAC CGACAAGATG
CCGTTCCGTC AGGCGATAAA AGATGAGGCG GGCCGCGCGC GCATCCAGAA GGCGGTCGAT
GCCCTGGCCA CCCTGCAGGC GAGCCTGGAA AACCAGGTGT TGCCACTACT CAAAGAGTGG
AAGGTATAA
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| Protein sequence | MKHFKYGAIA LTLISGLAAC GGSGSDEPEV VVPETGFSFD ADALIVNLSD EVIVKGYSTL
ADRGEALLQA TQTLVATPTQ ANLEAAQSAW KAARQPWEQG ESHIFGPVDS LGIDPHLDSW
PLNTTDLKTV LINSSGFDAE TIKGWNDDVQ GFHTMEFLLF GDGMDDNVKQ IDELTANERD
YLMGLAEVFR DYTKQLADAW LVSHDGQSGK AYGELLKSPG VDGNTFYSSQ VGVLEELIKG
MIGIVDEVGN GKIADPFGGS LASADTSKVE SQYSWNSLTD FSDNIIGVRN VYQGEFTGEA
DKQGIIDFVR AADSELASRI AAEIDAAILQ IHAIEGTDKM PFRQAIKDEA GRARIQKAVD
ALATLQASLE NQVLPLLKEW KV
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