| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0632 |
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| Symbol | |
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| ID | 4922097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 718786 |
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| End bp | 720231 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162165 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001092763 |
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| Protein GI | 127511566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC AAACTCTCGC CTGCACACTC GCCTTATGTG GCGGCTTAGG CCTTAGCGGC
CTGGCACTGG CCAATGACCT CCCCTTTCAG CCCCTGCCAG AAGGTAAACT TTATAAGCAA
GAAGATCGCC ACTACACTCC CTTCGACCTG GTGATTGGCG TCGACAAGAA CACTTATCAG
ACGCAGACGG TTGCCGGTCA GCTGAAACGG GTCTATTACA AGTTGCCAAG CAGCTATCTT
GCCTCCCACG CCGTCAACAA CTACAAGGCA CAGATCGAAA AACTCGGCGG CACAATATTG
TTCGAGTGTC AGGAGAAGGC CTGCGGCGAT GACCACAAAC TCTCAAAACA GATAGCGCCG
CTCAGCGACA TCCCCAAGAA GACACCCGCA CTGCTAACCA CCAAGCTCAC GCTTGCCAAG
AAACAGCTCT ACCTTTCCGT CTATGGCGCT AATTGGCACA ACGGCGCCGG CCTGCAGCTG
GATATCATCG AGGTGATTGA CGAGCCCTTG GATCTGCTTG CCACCAACCA GGCCTACCTG
ACAAGCGAGG TCAGCCAGAG CGAATTTAAG GACAGAGGCA ATAAGGATAC CCAAGGCTCA
AAGGATCACC CAATGATCGC CAGGCTGCCC GGCGCCTTCA TCCAAAAATA TCAGCAGCAG
GGCTATGCCC AGACCTTGGT ATTTGACGGT GTCGAACAGG GCCAGCACAA GATTAAGACA
TTAGAGGGTA AGGTCACCGA CATCGGCTAT AAACTCCCAA GGGGCTACTC GGAGTATGAG
GTTGACGCTA ACTATAAGGC GGCGCTGGAA AAGCTTGGCT TTGTCCGGGG CTTTCACTGC
CAGGGCTTAG CCTGTGGTAA GACAGATCTC ATCGAACGTC GCATCAAGAC ACTGATCAGC
ATAGGTTTCG ATGAAAACCA ATATTACAGC CTGTATCGAC TCGATCGCCC CGATGGCGCT
GTGCACGCCA TGGTCTTTAT CACAGGTTAT CATGGCGGCC TGTGGGGCGA GATAAAGGTG
GTGGAGGAGA CCAAACTCGT CGACGACAGA GTGGTCATCG ATCTCGAGGG GCTTAAGGAT
AAGATCGCCC AACAAGGCCA CGTGGCGCTG GATGGCCTGC TGTTCAAGTT CGACAGCGAT
CAGATGCTGC CCGAGGCAGA CGAAGTGATC ACCACCCTGG CCACCTACCT CAAGAGCCAT
CCCAAGCAGC ACTTCTATGT GGTGGGTCAC ACGGATGACC AGGGCAAACA GGGCTACAAC
AAGGGGCTGT CGGAGCAGCG GGCCAAGGCG GTGGTCGCCA CCCTCACCCA ATCTCACGGC
ATCAACAAGG CTCAGCTCAG TCCCATGGGC GTGGGCGAAT ATGTGCCTGT GGCCAACAAC
CTGGATGAGG CGGGCAGACA GCGTAATCGT CGCGTGGAAC TGGTACTGCG CTCAGACATG
CAATAG
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| Protein sequence | MKPQTLACTL ALCGGLGLSG LALANDLPFQ PLPEGKLYKQ EDRHYTPFDL VIGVDKNTYQ
TQTVAGQLKR VYYKLPSSYL ASHAVNNYKA QIEKLGGTIL FECQEKACGD DHKLSKQIAP
LSDIPKKTPA LLTTKLTLAK KQLYLSVYGA NWHNGAGLQL DIIEVIDEPL DLLATNQAYL
TSEVSQSEFK DRGNKDTQGS KDHPMIARLP GAFIQKYQQQ GYAQTLVFDG VEQGQHKIKT
LEGKVTDIGY KLPRGYSEYE VDANYKAALE KLGFVRGFHC QGLACGKTDL IERRIKTLIS
IGFDENQYYS LYRLDRPDGA VHAMVFITGY HGGLWGEIKV VEETKLVDDR VVIDLEGLKD
KIAQQGHVAL DGLLFKFDSD QMLPEADEVI TTLATYLKSH PKQHFYVVGH TDDQGKQGYN
KGLSEQRAKA VVATLTQSHG INKAQLSPMG VGEYVPVANN LDEAGRQRNR RVELVLRSDM
Q
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