| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0556 |
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| Symbol | |
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| ID | 4921419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 630235 |
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| End bp | 631125 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162085 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092687 |
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| Protein GI | 127511490 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACAA GTAGCAGCGA ACGCTCTGGC TTAATCGAAC TGCATCTGGC CGTCCTCCTG
TTTGGTGGTA CGGCCCTTTT CTCCAAGCTG ATTCCCCTCA GTGCCCTGGA TATCACGGCA
CTTCGCTGCT GCATCGCCGC CCTTGCCCTC GCTCTGTTGG TCAAGGTCAG CGGCAAGCAC
CTCAGGCTCA ATCGTGGTAA AGACTACGGC ATCGCCCTGG GGCTCGGCAT TATCGTCAGC
CTGCACTGGG TCACCTACTT TGCCGCAATG CAGCTGTCAT CGGTGGCCAT CGGCATGATC
GCCTTCTTTA CCTATCCCGT GATGACGGTT CTGGTGGAGC CTTTCTTTAC CGGCAAACGC
CTGGAGCTGG CCGACATCAT CAGCGGCATC TGTGTCCTGC TGGGCGTCAG CCTGCTGATC
CCAGAGGCCA ATCTGGGTAA CGATGTCACC CTAGGGATCA TCATAGGCGT TCTGTCGGCG
GCCCTGTTCA CCGCCAGAAA CCTGCTGCAC AAGCGCTACT TCGCCAGCTA CAGCGGCGCC
CAAGCCATGT ACTACCAGAC AGGGGTCAGC GCCCTGTTCC TGCTGCCTTG GCTCGAGGTC
GACCCAAGCG CCATCCAAGC CAACGTCTGG TGGTTGGTGA TCCTCTTAGG CATAGTCTTT
ACCGCCGCAC CCCACGCCCT GTTTACCTCG GCGCTGCGTC AGCTAAGCGC TAAGACGGTC
AGCCTGGTCT CCTGCCTGCA ACCCCTTTAT GGTGCCCTGT TAGCCCTGTT GATCCTGGGC
GAGGGACTCG CCATGAAGAC GCTGATTGGT GGCGCCTTGG TAGTCTTCAC CGCCGTCTAT
GAGACCCAGA AGAGCCATAA GGCCAACCGC GCCCAAAAGG CCAAATCCTA A
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| Protein sequence | MNTSSSERSG LIELHLAVLL FGGTALFSKL IPLSALDITA LRCCIAALAL ALLVKVSGKH
LRLNRGKDYG IALGLGIIVS LHWVTYFAAM QLSSVAIGMI AFFTYPVMTV LVEPFFTGKR
LELADIISGI CVLLGVSLLI PEANLGNDVT LGIIIGVLSA ALFTARNLLH KRYFASYSGA
QAMYYQTGVS ALFLLPWLEV DPSAIQANVW WLVILLGIVF TAAPHALFTS ALRQLSAKTV
SLVSCLQPLY GALLALLILG EGLAMKTLIG GALVVFTAVY ETQKSHKANR AQKAKS
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