| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0554 |
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| Symbol | |
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| ID | 4922522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 626221 |
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| End bp | 626928 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162083 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_001092685 |
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| Protein GI | 127511488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.200527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTCT ATGCTCACCG CGGTGCCAGC GGCTATGGCG CCGAAAATAC CCTGGCCGCC
ATCAAGAAAT CGGTCGCCCT GGGCTGTAAC GCCGTGGAGA TCGACGTGCA CAGCGTCGAA
GGCGAACTCT ATGTGTTTCA CGACAGGCGT CTCGACGGCA AAAGTTCGGG TACAGGTCTT
ATCGAGGCGG TGACTCAGGA GTATCTGGCC GGCGTTACCG TTGATGGCGA GCCCATCCCT
AAACTCTGGG AGCTGCTGGA GTACCTGCAA CCCTTCGATG CCCTGATCAA CATAGAGCTC
AAAGGGCTAA ACTCCCTCGG CCCCTTCATG GCCCTCTACC CAGAAATCCT GGAGAAGCTC
AACTACCGCC CCGATCAGCT GCTAATCTCA TCTTTCCATC ACGGCTTTCT GTTCACCCTG
AGACAGGCCT TTCCCGAGAT AGTGCTGGCG CCACTCATCG AGGGAGTGCC GGAAGACCTG
GCCGCCATAG TCACTCGGCT AGAGGCCTTC TCCCTGCACC TGAGCGTCAA CTTCGTCACC
CGGGAGTTGG TGGAGGATGC CCACGCCCGC GGCGCCAAGG TGTTTGTCTA TACCGTGGAT
AATCGCGACG ATATCCACTA TCTGTCGCAG ATGGGCGTCG ATGGCATCTT CAGTAATTTC
CCCGATGTCA GCGCCGACTG CGTCCATCAA CTGCTGCTGA CCCGCTAG
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| Protein sequence | MRVYAHRGAS GYGAENTLAA IKKSVALGCN AVEIDVHSVE GELYVFHDRR LDGKSSGTGL
IEAVTQEYLA GVTVDGEPIP KLWELLEYLQ PFDALINIEL KGLNSLGPFM ALYPEILEKL
NYRPDQLLIS SFHHGFLFTL RQAFPEIVLA PLIEGVPEDL AAIVTRLEAF SLHLSVNFVT
RELVEDAHAR GAKVFVYTVD NRDDIHYLSQ MGVDGIFSNF PDVSADCVHQ LLLTR
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