| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0524 |
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| Symbol | |
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| ID | 4922077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 594644 |
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| End bp | 595705 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162053 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_001092655 |
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| Protein GI | 127511458 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3258] Cytochrome c |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGA ATCTAATGAC ACTCAGCGGC CTACTCTTTT TTGCCCTTGG CAATAACGTA
CAGGCGGGTG ACTTACCCGA TAAGCAGGCT GAGCTGAAAC TGGCGGCGCC AGCGCAGGAT
GCGGATTATC TTAAGATGCG CTCCCTTGCC ACCATCCCCG AAGGTGTCTT CGGCGACAAG
GTACGCCTGG GCTATCAGCT ATTCGTTAAT ACCCAACAGC TTAGGGGCCA ATATGTGGGC
AACGAGCTGA ACTGCGTCAA CTGCCACATG GATGCAGGGC GCAGGGCCAA TGCCTCTCCC
TTGTGGGCCG CCTATCTGGC CTATCCTGCC TATCGCAAGA AGAACGATAA AGTTAATAGC
TATCAGGAGC GGATTCAGGG CTGTTTCACC TATTCGATGA ATGGCAAGGC GCCCGAGTCG
GGCAGCGAAC CCCTGGTGGC GCTGTCGGCC TACTCTTACT GGTTAGCCAT GGGGGGCCTG
ATGGATAAGT ATGGCGTGAC AGGCGCCGTG CCCGAGCTGA GCGATGCCGA GCTGCTCAAA
GGCGGCAAGC GGGAGGATTT TGTCTTGCCC GAGGCGATCG CCAAGGCCAC GACACTCGAT
GAGCGTGCCA AGTTGCCGGG CAGAGGCTTC CCCGCCATCC CTAAGCCCGA ACAGGCTTAT
TCACCTGCGC GCGGCGAGCA GGTCTATCGG GCTCATTGCC AGTCCTGCCA CGGTGAAAAC
GGTGAAGGGT TAGCCATGGG CGGTGTCTAT AGCCTGCCGC CGTTGTGGGG GCCGAACAGC
TTTAACTGGG GAGCTGGCAT GCACAGGGTC AACACGGCGG CCAATTTCAT CTATGAGAAT
ATGCCTCTGG GTAAGAGTGT ACAGCTTTCT CATCAGGAGG CCTGGGACGT GGCGGCCTTT
GTGGTCTCCC ATGAGCGACC ACAGGACCCG CGACTGGAAG GCGATAAGGT GATGGAGCTG
AGCAAGCGCT ATCACCAGCA TCAAGGCTAT TACGGCAAGA GTGTGGGTGA GGGGGCCGTG
CTCGGCACTC AATCCTATCC TATCAATCCG GTTAAGCAGT AA
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| Protein sequence | MNRNLMTLSG LLFFALGNNV QAGDLPDKQA ELKLAAPAQD ADYLKMRSLA TIPEGVFGDK
VRLGYQLFVN TQQLRGQYVG NELNCVNCHM DAGRRANASP LWAAYLAYPA YRKKNDKVNS
YQERIQGCFT YSMNGKAPES GSEPLVALSA YSYWLAMGGL MDKYGVTGAV PELSDAELLK
GGKREDFVLP EAIAKATTLD ERAKLPGRGF PAIPKPEQAY SPARGEQVYR AHCQSCHGEN
GEGLAMGGVY SLPPLWGPNS FNWGAGMHRV NTAANFIYEN MPLGKSVQLS HQEAWDVAAF
VVSHERPQDP RLEGDKVMEL SKRYHQHQGY YGKSVGEGAV LGTQSYPINP VKQ
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