| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0503 |
|---|
| Symbol | |
|---|
| ID | 4923801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 561271 |
|---|
| End bp | 561612 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640162032 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001092634 |
|---|
| Protein GI | 127511437 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAGT TAACCGCCGA TAACATAGAG TCAAGTGACG CCTTGGACGA CTACTTAGCC
GCCCATGAGG CCGTGCTCCT GCTCTTTGGC GGCGCCCACT GCGGCGTCTG TCAGAGTATC
AAGCCCAGGC TGCTGCAGAT GCTAGCCGAA GAGTTTCCCA AGATGCGCCT CTGCTATATC
GACTGTGAGC AGCAGGGCGA TATTGCCGCC GCCCACAGGG TGTTCACCCT CCCCGTCGTC
GAGCTCTACT TTCAGGGGCA GGCGTTTGCT CGCTTTGTGA AGGTGTTTGC CATGGTCGAG
GTAAGAGAGG CGATCGCTCG CCCCTATCAA TTGCTGGACT GA
|
|---|
| Protein sequence | MPQLTADNIE SSDALDDYLA AHEAVLLLFG GAHCGVCQSI KPRLLQMLAE EFPKMRLCYI
DCEQQGDIAA AHRVFTLPVV ELYFQGQAFA RFVKVFAMVE VREAIARPYQ LLD
|
|---|
| |