| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0454 |
|---|
| Symbol | |
|---|
| ID | 4921311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 504816 |
|---|
| End bp | 505625 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640161983 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001092585 |
|---|
| Protein GI | 127511388 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.500055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATC CCCACGTCAC CCTGACCATA GCCGAGGGCA TCGCCTGGGT AGAACTGTCA
CGGCCGGAAA AGTACAACGC CCTCAACTAT GCGCTGTTCG ACTCTATCGT GAAGGTGCAG
AAGGTTATCG CCGGGCGCAG AGACGTGCGG GCGGTGATCC TCAGTGGCAG TGGCGGTAAC
TTCTGCTCCG GGCTGGATGT GGCCAGCGTG ATGAAGTCAC CCATGCAGGC GTTTAAGTTG
CTGTTTAAAT GGCTGCCGGG CAATGCCAAC CTGGCGCAAC GGGTCTCCAT CGGCTGGCGC
CGCCTGCCCG TGCCAGTGAT CTGCGTGCTC GAGGGGATCT GCTATGGCGG CGGCACTCAG
ATAGCCTTGG GGGCCGACAT GCGTATCGCC GCGCCAGACT GCCGTCTCTC TATCATGGAG
GCCAAGTGGG GCCTGGTGCC CGACATGGCC GGCCTGGTCG GCCTGCGGGA GCTGGTAGGT
AAGGATGTGG CTATGCAGCT CACCATGACC GCCGAGGTGA TCGATGCCGA GCAGGCCAAG
GATTATGGCC TGGTGACCCA GGTGAGTGAG GCGCCGCGCG AGGCCGCCGA GGCACTGGCC
TTGCGGCTGG CGAAAACCTC CCCCGATGCT AACGCCGCGA TCAAGTTCAG CATTAACAAG
AGTTGGCGCG CCGGTGAGCG CAGCCTGCTG GCGCGGGAAT CTCTGAGTCA GGTACGCCTG
TTGCTGGGTA AGAACCGGGT GATAGCCGCC CTGCGTCAGA CCAAAGATCC CGAGCGGCGC
TACCGGCCGC GTCAGCCCTG GTGGCGCTAA
|
|---|
| Protein sequence | MQHPHVTLTI AEGIAWVELS RPEKYNALNY ALFDSIVKVQ KVIAGRRDVR AVILSGSGGN
FCSGLDVASV MKSPMQAFKL LFKWLPGNAN LAQRVSIGWR RLPVPVICVL EGICYGGGTQ
IALGADMRIA APDCRLSIME AKWGLVPDMA GLVGLRELVG KDVAMQLTMT AEVIDAEQAK
DYGLVTQVSE APREAAEALA LRLAKTSPDA NAAIKFSINK SWRAGERSLL ARESLSQVRL
LLGKNRVIAA LRQTKDPERR YRPRQPWWR
|
|---|
| |