Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0447 |
Symbol | |
ID | 4921049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 497998 |
End bp | 499203 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640161976 |
Product | hypothetical protein |
Protein accession | YP_001092578 |
Protein GI | 127511381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000225719 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATT TCAATGCCCG CCTGTCGGCG GTTGCTCTTG CCTGTGCCTG TTTACCTAGC CTAATGCCAA GCCTAAGTTT CGCGGCGGAT CCTAGCCTGA CTAACCCTGC CATCAGTGCG GTGCTCGATG GTTATTATCA AAACGCCGAG CGCCCTATGG CAGAGCGTGT CGAGGGCTTC GGTCTGGGTC ACACAGAGCT GGCCCTGAGC GCCAACATAG ATGACATGTT CTATGGCAAG TTGACCACAG TCATTGAGGT CGCTGATGGC GAGACCAAGG TGGGACTCGA AGAGGCCTTC ATCCAGACGT TGGCGATGCC CTATGGTCTG TCGATGCGCG GCGGTCGTTT CCTGTCGGAT GTGGGTTACC TTAACAATCA GCATGTGCAC AGCGATGCCT TCTCCGATCG TCCGGCGGCC TATCGCGCCT TCCTCGGTGG GCATTACTTC GATGACGGTG TGCGTCTGGA CTATGTCGCG CCAACGGATC TCTACTGGAG CATGGGTGTC GAGGCCTTCA AGGGCGATAA TATGCGCGCC GAAGATGAAC ACGGCGAGCG CGAATTTAAG AGCGTCGGCG TCTACACCGC CTACACTAAG TTGGGTGGCG ATATTGGTGT CAGCAGCTCC TGGCAGCTGG GTCTGAGTTA TCTGCGTAAC GAAAACGGTC GCCTCAGCGC CCATGAGGAG CATGAAGAAG CCGTGGTGGC CGAGGATGGT CATGACCATA GTCATGGGGT CAGCTATACG GGTGAGAACA CCTATATGGC GGACTTCGTC TACAAGTGGG CGCCCCAGGG CAACTACAAG TATCAGCATC TGACCCTGAG CGGCGAGTAT TTCCGTGTGA GCGACTATGC GCCGCTGGAC GACCATGACC ACGAGGCGGT GGACGATCAT GATACCGCTA AGCCGGATGC CCACACGGGT TGGTATCTAA GCTCTGTGTA TCAGTTCTCG CCAAACTGGT CGGCGGGTCT GCGTTATGGT CAGGTCGATA CCCATCTGAT GCACGATGAG CACTTCGATG CCCAGAAGCT GAAAGAGACT GAGGTGAGCC TGGCCTGGCA TCACAGCCAC TTCTCCACCG TGCGCCTGCA ATATACCAAT CAGCAAGGCA CTAACTTTGA CGGCATCACA GATGATAATG TCATTACTCT TCAATATGTT ATGACTCTGG GGGCTCACGG TGCGCATCAA TTCTAA
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Protein sequence | MMNFNARLSA VALACACLPS LMPSLSFAAD PSLTNPAISA VLDGYYQNAE RPMAERVEGF GLGHTELALS ANIDDMFYGK LTTVIEVADG ETKVGLEEAF IQTLAMPYGL SMRGGRFLSD VGYLNNQHVH SDAFSDRPAA YRAFLGGHYF DDGVRLDYVA PTDLYWSMGV EAFKGDNMRA EDEHGEREFK SVGVYTAYTK LGGDIGVSSS WQLGLSYLRN ENGRLSAHEE HEEAVVAEDG HDHSHGVSYT GENTYMADFV YKWAPQGNYK YQHLTLSGEY FRVSDYAPLD DHDHEAVDDH DTAKPDAHTG WYLSSVYQFS PNWSAGLRYG QVDTHLMHDE HFDAQKLKET EVSLAWHHSH FSTVRLQYTN QQGTNFDGIT DDNVITLQYV MTLGAHGAHQ F
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