| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0421 |
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| Symbol | |
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| ID | 4922430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 475257 |
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| End bp | 475505 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640161950 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001092552 |
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| Protein GI | 127511355 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGATT TAGAGAAAAT TAAGATATTA ACCCGGGGTG AGAAGGGCGT TATCGCCGGC
GTCTGCTCTG GGTTGGCCGA CTATTTCGGT TGGCGAGTCA ACGGATTGCG GGTCGCTTTT
GTCCTTAGCA GCCTATTCTT CTTCCTACCG GTTTTAGTCT ATCTGGTGTG CTGGTTAGTG
TTGCCAAAAT ATCCCACAAC CCAAGCGATG CGCCGTCAGT TGCAGCGAAA GGCCAACCAA
GCTCGTTGA
|
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| Protein sequence | MADLEKIKIL TRGEKGVIAG VCSGLADYFG WRVNGLRVAF VLSSLFFFLP VLVYLVCWLV
LPKYPTTQAM RRQLQRKANQ AR
|
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