Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0417 |
Symbol | |
ID | 4921978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 471407 |
End bp | 471754 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640161946 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_001092548 |
Protein GI | 127511351 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTAG CAATCTTTAA AGCCCTGTCC GATGAGACCC GTCTGCTGAG CCTGCTGCTG ATCCAGGCCG AGGGCGAGCT GTGTGTGTGC GAATTGATGG TGGCGCTGGA CGAGAGTCAG CCCAAGGTCT CGCGTCATCT GGCGCAGCTA CGCAAGGCGG AACTGCTCAG CGATCGCCGC CAGGGCCAGT GGGTGTTCTA CCGTATTAAC CCTGAGCTGC CCGACTGGGC GGGCGAGGTG ATCCAAAAGA CGCTGGCGGG CAACCCTCAG CTGTTGAGTC AGGCCCAGGC CAGGTTGGCC AAGATGGGTC AGCGCCCCGA GCGGGTGCAA GTCTGCTGTA AGGGATAA
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Protein sequence | MAVAIFKALS DETRLLSLLL IQAEGELCVC ELMVALDESQ PKVSRHLAQL RKAELLSDRR QGQWVFYRIN PELPDWAGEV IQKTLAGNPQ LLSQAQARLA KMGQRPERVQ VCCKG
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