| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0399 |
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| Symbol | |
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| ID | 4920883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 448358 |
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| End bp | 448909 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161928 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001092530 |
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| Protein GI | 127511333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.464291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTA GCAGAGCCAT CTTACCAAGG CGCGCCTCAG GCTTTACCCT GATCGAATTG
GTCGTGGGCA TGATAGTGCT TGGTATCGCC CTGGTCATGC TCACCAGCAT GCTGTTTCCC
CAGGCGGATC GCGCCGCCGA AACCCTTCAC AGGGTGCGCT CTGCCGAGCT GGCCCATTCC
CTGCTCAATG AGATCTGGGG CAAGCGTTAC GATCAGAACA GCAATCCTAA TGGCGGCGTG
CCCGCCTGTG GCGCGGCGGC CAGGCCAGAC CTTGGATTGC CAGCAGGGCT GCCCTGTACA
GACCAAGCCA ACTTTGGCCC GGGCGGACTC GATCGCAACG CCTATCGCGA TGTGGATGAC
TATCATGGCC TGACCCAGGC CAGCAAGATG CTCAACTCGG ATCGCACCTA TGCTCAGGAA
TATATTAACT ACCAACTATC GGTCAGCGTC ACCTATCCCG GCAGCGACAA GAACAGCAAG
CTGGTGGCGA TCAATGTGAC CACACCCAGT GGCGAGGTGA TCACCTATAA TGCGCTGCGG
AGTAACTACT GA
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| Protein sequence | MDASRAILPR RASGFTLIEL VVGMIVLGIA LVMLTSMLFP QADRAAETLH RVRSAELAHS
LLNEIWGKRY DQNSNPNGGV PACGAAARPD LGLPAGLPCT DQANFGPGGL DRNAYRDVDD
YHGLTQASKM LNSDRTYAQE YINYQLSVSV TYPGSDKNSK LVAINVTTPS GEVITYNALR
SNY
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