| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0382 |
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| Symbol | |
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| ID | 4924115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 431735 |
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| End bp | 432505 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640161911 |
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| Product | nuclease |
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| Protein accession | YP_001092513 |
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| Protein GI | 127511316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA TTCTGGCCCT CTCTCTTTCT CTCTGCTCCT TCCTGGCGAC GGCCGCTGGC
AGCCTGTGCG CGCCGACCCA TTATGATGAG ACTGTCACCT TCGCCTCGGT GATCGATGGT
GATACCTTGA TGCTGGAAGA TGGCCGTCAG CTGAGGCTTA TCGGCATCGA CTCGCCCGAG
ATAGACAGGC ACTACCCAGA GCTGTCTGAG CCCTTCGCCA ATCGCGCGCG CAATTTCCTC
GCCTCGCGTC TGCTGCCTGG GCAGAAACTC AAACTGGCCT TCGATCGTAA ACGTCTGGAT
CCCAAAGGGA AAACCTTAGC CTATGCCTAT ACCCAGGAGG GAGAGCACCT GCAGGAGATA
ATGCTGAGTC AGGGCTATGC CAAGGCGAGG GTCTATCAGA ATGATTATTT CTGGCAGTGT
TTGGTCAATA TCGAGCGCCA GGCTCGTCAA GAAAGACGTG GATTATGGAG CCATAAAAGC
TATCAAGCCA AGTCGCCGGA TGAGCTAAAT CGTGACGATC GCAATCGCTG GCGAGAGGTC
AGAGGAGTGG TGACGGGTTT TGAAAGAAAA GGTCAGCAAT TGTGGCTGAT TATCGATGAA
ATCTTTTATG TGGGTATACC TAGAGAAGAA TCTGGTAAAT TTAGCAACAT TTTAACCCTG
AACCTGCTTG AAAGTCCGGT AATTGTGCGT GGTGAGTTGT ATTATTCCTA CAAAAAATGG
CAGATGATCG CCCATCATCC TTCGCAGATA AGTTTGCAAA ATAAGCCTTA G
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| Protein sequence | MDKILALSLS LCSFLATAAG SLCAPTHYDE TVTFASVIDG DTLMLEDGRQ LRLIGIDSPE
IDRHYPELSE PFANRARNFL ASRLLPGQKL KLAFDRKRLD PKGKTLAYAY TQEGEHLQEI
MLSQGYAKAR VYQNDYFWQC LVNIERQARQ ERRGLWSHKS YQAKSPDELN RDDRNRWREV
RGVVTGFERK GQQLWLIIDE IFYVGIPREE SGKFSNILTL NLLESPVIVR GELYYSYKKW
QMIAHHPSQI SLQNKP
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