Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0371 |
Symbol | |
ID | 4923752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 419234 |
End bp | 420100 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640161900 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001092502 |
Protein GI | 127511305 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins [COG3449] DNA gyrase inhibitor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAG CAGCGCACCA GGCCTATAGT CAACGAATCC AGACGGTTTG TGACTATATC GCGAAACATC TGGAGCAGCC CCTGACGCTG GAACAACTGA GCCAGAAGGC GCACTTCTCC AAGTATCATT TTCATCGCCA GTTTCAGGTG TATACCGGTA TAACCTTAGG TAAATACATC AGCCTGCTCA GGCTGAAGCG GGCCTCATAC CGATTGGTGT TTCATCCCGA ACTCAAGATC ACCGACATCG CCCTCGATGC CGGGTTTGAG AACGGCGAAT CCTTCTCGCG AGCCTTTAAG CAGGTATTTG CCCAGACCCC GACCCAGTTC AGGTTAACGC CTAAGTGGGA GCAATGGAGT CAACAATATG CCAAGGTGAA CTATACAAGG AGAGAAACTG TGCAGATCAA ACTCACGCAA AGAGACGATA TCAAGGTCGC CGTGCTGGAA CACCAAGGCA GCCCGGCCGC ACTGAACGAC TCGATTCAAC AATTTATCAA CTGGCGTAAG CAGAGCGGCG AATCCCCTGT GGCCAGCAGC CTGACCCTGG GCGTACCCTT TAACGACCCT AACACGGTAG CGCCCGAGGC ATTTCGTTTC GACATCTGTG GCTCGGTAAC GGCCGAGGTC AAGGCCAACG ACTTTGGAGT GATCACCAAG ACGATCCCCG GCGGTCGCTG CGCCGTGATC CGCCATCTTG GACCGCACGA TCAGATGGAC GATAAGATCT ATCAGTTCTA CCGCGACTGG CTGCCCCAGA GCGGCGAGGA GCTGAGGGAC TTTCCTCTCT ACTTCGAGTA CCACAACTTC TTCCCCGAAG TGGCGGAGCA TGAGCTGGTA ACAAAGATCT ATTTTTCACT GAAATAG
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Protein sequence | MNRAAHQAYS QRIQTVCDYI AKHLEQPLTL EQLSQKAHFS KYHFHRQFQV YTGITLGKYI SLLRLKRASY RLVFHPELKI TDIALDAGFE NGESFSRAFK QVFAQTPTQF RLTPKWEQWS QQYAKVNYTR RETVQIKLTQ RDDIKVAVLE HQGSPAALND SIQQFINWRK QSGESPVASS LTLGVPFNDP NTVAPEAFRF DICGSVTAEV KANDFGVITK TIPGGRCAVI RHLGPHDQMD DKIYQFYRDW LPQSGEELRD FPLYFEYHNF FPEVAEHELV TKIYFSLK
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