| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0358 |
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| Symbol | |
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| ID | 4921737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 406528 |
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| End bp | 407808 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161886 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001092489 |
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| Protein GI | 127511292 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAAAA TTACGCCATA TCTTGAGTTC GATGATGAGG CGCACCAACT ACACGATCGT
ACCTGTGGCG CCACGATAGG GCTGAGCTTT TCCGAGTCGG CGGTGTTGGC TCACCTGCTT
TCGCAGCCCG ATGCCATCTG CGACAAGGAG GCCTTGATTG CTGTGGGTTG GCCCGATCGT
GTGGTGGCGG CAACCTCGCT GACTCAATGC ATCAGCACCC TGCGCAAGAA GCTGGAACCC
TTTCCCGAGA TACAGTTAAA GACCATAGCC CGGCGTGGTT ATCAGCTCCA TGTTTCGCCT
AAATCCCATG TGACCATGTT GGCGGTAAGC GATGCGGGCT CGATCAAAGA TGCGCTCATC
GATGTCTCCC TTATGGTCAA GGTCAGTGGC ATTCTGATCT TGCTGGGGAT AGTGGCGACC
CTCTGGTATC AGAGTGATTA TCACCAGGTG ATGAAGCATG CGGCCAGATG GGCCTCGGAT
CATGAGATCA ATCTCGACAT TGGTGGTACC ACCCGGCCCG TGACGCTGAT AAACCCCAAG
GGGGTCGATA GCCTGCACCC TTCCATGTGG CAGAAGCATA TCGCACCTGA GAGCAATAGC
ATCCAAGGGT TTAATAACTT TGGCGGCTTT GCCTTTACCG ATGGCAACCA CTATTCGATG
GCGCTCTGCG ATCTGGATGA ACGCGGCGAG TGTCGCCGGG ACAAGATAGT CAACCTGACG
GCGATCGATC TTACCCCGGC GGGGCTCAAC ATGGTGGAAT TTGTCGAGCT GAGTAAGCGG
ATGGAGGAGC GGATTCGCTA TAACCGTATC CTTATCCCGC CTGGTGAGGC TGGCGGTGAC
CTGGTGGAAC ATCACTACAA TGGTGACGTC TATTTTCCCG TGGCCGACGA GTTGTTGGTA
CGCGCCGACA TAGGGATCTC TCTGGTGTAT GAGCAGCCCC TCGGCGGCAA GTTTTACTCC
CGCGCCTGTA TCACGGACCA GGACTGTCTG ACCACGCCGA TTAAGTATCA GATCCGCGGC
GAGTTCGAGC AGTATCGCCA GAAGCTGGGG CAACTGGATG TGGACGTGTT TCATGTGAAG
GTGAGGCAGA AAGATCTCAT CATGCCCGAT GTGGTGAGTG CCTCGGCGAT GCACTTCTAC
CGCGAGATCC GCAAGCACAA CATTCGCGAT GAAGAGTTGT TTTATATGCG GGTCCATGCC
GACAACGGCA CGGCGGTGTG GGTGGTGCCT CTGCTGGGCA GCCTGGTGGC CTGGACCAAA
TATGAGAAGG TAGCGCTTTA G
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| Protein sequence | MLKITPYLEF DDEAHQLHDR TCGATIGLSF SESAVLAHLL SQPDAICDKE ALIAVGWPDR
VVAATSLTQC ISTLRKKLEP FPEIQLKTIA RRGYQLHVSP KSHVTMLAVS DAGSIKDALI
DVSLMVKVSG ILILLGIVAT LWYQSDYHQV MKHAARWASD HEINLDIGGT TRPVTLINPK
GVDSLHPSMW QKHIAPESNS IQGFNNFGGF AFTDGNHYSM ALCDLDERGE CRRDKIVNLT
AIDLTPAGLN MVEFVELSKR MEERIRYNRI LIPPGEAGGD LVEHHYNGDV YFPVADELLV
RADIGISLVY EQPLGGKFYS RACITDQDCL TTPIKYQIRG EFEQYRQKLG QLDVDVFHVK
VRQKDLIMPD VVSASAMHFY REIRKHNIRD EELFYMRVHA DNGTAVWVVP LLGSLVAWTK
YEKVAL
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