Gene Shew_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0302 
Symbol 
ID4923909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp324124 
End bp324891 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content56% 
IMG OID640161826 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_001092433 
Protein GI127511236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCGA ATCCACCCTC CAATCTCTAT TTTTCCGTGG TGCTACTCTG GAGCGGTCTG 
ACGCTGATCC CCGCCGCAAT CTACTTAGGC GGACTAAGCC TGTTTCCCTG GCTCGAGCTC
AGTTCCCTCA AGGCGCAGAT ACTCTTTGGC TTAACCAGCT CGGGCACGGC GCCCTATGGT
GTGCTCACCG TGCTGGCCCT GCTTCTCGCC TGTTATCTGT TGCTGCCACG CAAACAGCTA
GTGCCTCTAC TGTTTAGCGT CTGCCTCGCC ATGGGGCTCA GCCTGGGGCT AAATCACTTT
CTCAAGCCTT ACTTCGGCCA CCCCAGACCC AATGTGCAAT TCTTGGCAGA GAACCAAGGG
CTGTCGCTTA GCGGTTTTTA TCAGGCCAGT CAGCCGACGC GGCGGATATT GATGGCACAA
GAGGTTGCCA AGCTATCACA GGAGATCAAG CTGCCACAGG AGACCAAGCT ATCCCTCTCC
CCCAAGATAG CCCAGCATTG GCAAGATGAG GTGGGTTACT CGTTTCCCTC GGGTCACACC
CTGTTTGCGG TGACGCTCAC CCTAGTCGTA AGCTATTTTT TGTTGGCGGC GCAAAGGTTT
TTATTCGCCG CTCTGTTATG CTTATGGGCG CTGGCCATGG GGTTTAGCCG CATGTTACTG
GGCATGCACT GGCCTCAAGA TGTCTTGGCG GCATCCTTGC TCGGCGGCCT TATCGCCCTG
CTCGCCTTGC TGATCACCGA GAAATGGCGC GCCATCGGCC AAGGCTAG
 
Protein sequence
MRSNPPSNLY FSVVLLWSGL TLIPAAIYLG GLSLFPWLEL SSLKAQILFG LTSSGTAPYG 
VLTVLALLLA CYLLLPRKQL VPLLFSVCLA MGLSLGLNHF LKPYFGHPRP NVQFLAENQG
LSLSGFYQAS QPTRRILMAQ EVAKLSQEIK LPQETKLSLS PKIAQHWQDE VGYSFPSGHT
LFAVTLTLVV SYFLLAAQRF LFAALLCLWA LAMGFSRMLL GMHWPQDVLA ASLLGGLIAL
LALLITEKWR AIGQG