| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0287 |
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| Symbol | |
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| ID | 4920618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 305476 |
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| End bp | 306360 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161811 |
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| Product | DNA-binding transcriptional regulator IlvY |
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| Protein accession | YP_001092418 |
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| Protein GI | 127511221 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.125086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC GTACCATCAA ACTCTATCTG CATCTGAGCA ACAGCCTGCA CTTTGCCCGC
ACCGCCCAGC AGATGCATGT CAGCCCCTCT ACCCTGAGCC GCGCCATGCA GCGCCTGGAG
GAAGAGGTCG GTGCCAAGCT GTTCGAGCGC GACAATCGCA GTGTGACCCT CACCAATGCA
GGGGTGGAGT ATCGTCACTT TGCCGAGCAG ACTCTGGATA ACTGGAGCAA GCTGAAACAC
AGGCTGGATC CCAAACAGGA TCTGCTGCGC GGCCGCCTCA ACATCTACTG TTCGGTCACC
GCCGCCTATA GTCATCTGCC GGCGCTGCTG GATCGCTTTC GTAACGAACA TCCCCTGGTG
GAGATCGCCC TCACCACGGG GGACGCCGCC AATGCGGTAG AGATGGTGCG GCAGAACCGC
GCCGACATCA GCATCGCCGC CAAGCCCGAG TCCCTGCCCG AGTCCTTGCA TTTCATCAAG
ATAGACAATG TGCCCCTGGT GATCATCGCC CCTACCTTCA AATGCGCGGT GCAGGAGCTG
CTGACCGAGC CCTATATTCC TTGGGATCGC CTGCCCTTCA TCCTGCCGGA ACATGGCCCG
GGACGACTAA GAATCGAGAA TTGGTTCAAG CAGTTAGGGC TCAGTGCCAA TGTCTACGCC
CAGGTCTCGG GGCAGGAGGC AATAGCCTCC ATGGTGGCAC TGGGCTGTGG GGTGAGCATC
ACGCCCGAGG TGGTGATTCA AAACAGCCCG GTGAAAGACA GGATCCAGCA GCTGAGCTCG
CCGGTCGCCA TCCCCCCCTT CGAGCTGGGC TGTTGCAGCA AGAAAAGCCG TGAAGATGAG
CCGGTGATCG CCGCCTTCGT CAAAGAACTC AATGCGGTCA ATTAG
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| Protein sequence | MDIRTIKLYL HLSNSLHFAR TAQQMHVSPS TLSRAMQRLE EEVGAKLFER DNRSVTLTNA
GVEYRHFAEQ TLDNWSKLKH RLDPKQDLLR GRLNIYCSVT AAYSHLPALL DRFRNEHPLV
EIALTTGDAA NAVEMVRQNR ADISIAAKPE SLPESLHFIK IDNVPLVIIA PTFKCAVQEL
LTEPYIPWDR LPFILPEHGP GRLRIENWFK QLGLSANVYA QVSGQEAIAS MVALGCGVSI
TPEVVIQNSP VKDRIQQLSS PVAIPPFELG CCSKKSREDE PVIAAFVKEL NAVN
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