| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0284 |
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| Symbol | |
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| ID | 4920639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 302166 |
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| End bp | 303491 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161808 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092415 |
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| Protein GI | 127511218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0334132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTAC TAGATAACAT GTTGATTATT TTGCTGTTAA TCGGCACCAG TTGTTTTTTC
TCCATGTCGG AGATCGCCCT GGCGGCGGCA CGTAAGATCC GTCTGCGTCA GCTGGCCGAC
GAGGGAGATC CTCGCGCGGA AAGGGTGTTG CAGCTGCAGG CCCATCCCGG CAGCTTCTTT
ACCGTGGTGC AGATAGGGCT AAACGCGGTG GCGATCATGG GCGGTATCGT CGGTGAGTCG
GCCTTTACCC CTTATATCAG GGCGGGGCTA GAGTCCTGGG TGGCCGATCC CTGGCTCAGC
CAGCTCAGCT TTGTGTTGTC ATTCATCATA GTGACCAGCC TGTTTATTCT GATCGCCGAC
CTGATGCCTA AGCGAGCGGC CATGGCGATG CCCGAGCGGG TGGCGCTGGT GCTGGTGGGG
CCCATGACCT TCTGCATCCG CCTGTTGACG CCCCTGGTTT GGGTGTTCAA CGGTCTGGCC
AATGCCATCT TTCGTCTATT GCAGATCCCC ACGGCCCGTA ACGACCAGGT GACCTCTGAC
GACATCTATG CGGTGATGGA TGCCGGCGCC GAGGCGGGCG TGCTGGATAA GGATGAGCAG
CAGATGATCG AGAACGTGTT CGAGATGCAG ACGGTACCTG TCACCGCGGC CATGACGGCG
CGGGAGAGTC TGGTCTACTT CCTGCTGCAG GACGATGAGG AGGTGATCAA ACGTAAGATC
GCCGAGGATC CCCATACCAA GTTTTTGGTG TGTGACGGCC AACTGGACAC CATCAAGGGG
GTCGTCGATG CCAAGGAGTT GTTGATTCGG GTGATCAATG GCCAGAGCAT CACCCTCAAG
GACAGCACCT TGGTACACAA CTGTCTGATC ATCCCAGACA GCCTGAGCCT GTCGGAGTCG
ATGGAATATT TTAAGAATCA CAGGGCCGAC TTTGCCGTGG TGATGAACGA ATATGCCCTG
GTGGTCGGCA TAGTGACCAC CAATGATCTG CAGAGCGCCG TGATGGGCGC CTGGTCACTC
CATGAGAGCG AGGAGCAGAT CATCGCCCGG GATAAGGATT CCTGGCTGGT GGATGGCGTG
ACGCCCATAA CTGACGTGAT GCGCGCCTTC GGTATCGAGG CCTTCCCCCA GAGTCAGAAC
TACGAGACCA TCGCCGGCTT CATGATGTTC ATGCTGCGTA AGATCCCCAA GCGTACCGAT
TTTGTGAATT TCGGTGGCTA CAAGTTTGAG GTGGTGGATA TCGATGCCTA TAAGGTGGAC
CAGCTGTTGG TCACGCGCAT CCCCGCCGAG GCGACGCCGC CCCTAGTGGC GGCAGTCGAA
CAATAA
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| Protein sequence | MSLLDNMLII LLLIGTSCFF SMSEIALAAA RKIRLRQLAD EGDPRAERVL QLQAHPGSFF
TVVQIGLNAV AIMGGIVGES AFTPYIRAGL ESWVADPWLS QLSFVLSFII VTSLFILIAD
LMPKRAAMAM PERVALVLVG PMTFCIRLLT PLVWVFNGLA NAIFRLLQIP TARNDQVTSD
DIYAVMDAGA EAGVLDKDEQ QMIENVFEMQ TVPVTAAMTA RESLVYFLLQ DDEEVIKRKI
AEDPHTKFLV CDGQLDTIKG VVDAKELLIR VINGQSITLK DSTLVHNCLI IPDSLSLSES
MEYFKNHRAD FAVVMNEYAL VVGIVTTNDL QSAVMGAWSL HESEEQIIAR DKDSWLVDGV
TPITDVMRAF GIEAFPQSQN YETIAGFMMF MLRKIPKRTD FVNFGGYKFE VVDIDAYKVD
QLLVTRIPAE ATPPLVAAVE Q
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