| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0277 |
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| Symbol | |
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| ID | 4920679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 294605 |
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| End bp | 295390 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161801 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001092408 |
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| Protein GI | 127511211 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00084176 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATGTC CCACTGAAAC TTTGCCCATG ATGCGTTGCA ATCAGATATT GGATGCCGCC
GAGCGGCTCA TCGAGTCTCA GGGGATCGTC TCGTTCAAGT TCTCTCAGTT GGCCAAAGAG
GTGGGGTGTT CCACCGGGAC CCTGTATAAG TTTTTCGAGC GTAAAGAAGA TGTGTTGGTG
TGTTTGTTTT TACGCAGCGC CACCTCGAAT CATCTGCCGA TTTTTATCGA TAAGCATCCG
GAGCTGAGCG AGTTGGAGAA AGTGCTCCTG CCTGTATTGT TCACCTTCGA AACCATCAGC
CGCAGCAAGA GTTTCTTCAC CCTACGTTCG GTCTCGGTTA ACACCATGGT GTGGCAGCTG
GCCAGCGATG AGAAAGTGGA GCGCTTTAAG AAACGCATCA ACGCCTTCTG GGGCTGGTTT
ACCGACTCGC TCCATGCCGC CGTGGAGCAG GGAGAGTTAC AGGCCACACC GCTACAGATC
AAAGAATTGG TGCAGGGGCT AACCTTCTAT CTAACCGGTT CATTGACTCA GTTTGAGAGT
CAATTAATCG CGCCCGAGTA TCTGTCTAAC CGGCGAGAAA CCTGTTACCG CCATCTGGCC
AAGTTGATGG GGCAGTACAA GTGGAACCAA GCATTAACCC CTGAGCTGTT CGATAGTCTC
GAGGCGAGAA CCAAGGCATT TTTTGACCAA CATTACCGCG ACCATATGAC CTGCGCGGCC
TGCAGTGCCC TATCTGGCGT AAATCTGAAA GATCGCCCTG CCTGCGTCAG ACAGGCTTAT
CAATAA
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| Protein sequence | MKCPTETLPM MRCNQILDAA ERLIESQGIV SFKFSQLAKE VGCSTGTLYK FFERKEDVLV
CLFLRSATSN HLPIFIDKHP ELSELEKVLL PVLFTFETIS RSKSFFTLRS VSVNTMVWQL
ASDEKVERFK KRINAFWGWF TDSLHAAVEQ GELQATPLQI KELVQGLTFY LTGSLTQFES
QLIAPEYLSN RRETCYRHLA KLMGQYKWNQ ALTPELFDSL EARTKAFFDQ HYRDHMTCAA
CSALSGVNLK DRPACVRQAY Q
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