Gene Shew_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0275 
Symbol 
ID4920726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp292382 
End bp292750 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content58% 
IMG OID640161799 
Producttetraheme cytochrome c, putative 
Protein accessionYP_001092406 
Protein GI127511209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000173309 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAAT GTATTGTAAC CCTCCTACTC GGGCTAGCAC TCTCATCGGG CGTCTACGCG 
GGCGAACTCG TCAAGATGAA GGGTAAGACC CAGGGACGCA CCAACCACGA GTTTATCTAT
CAGGATGGCT GCCAAGGCTG CCATCAGGGT TCGGGCAAGA AGAACGCCAC CGACAGCGCC
TGCGTCGAGT GTCATGGCGA GATCAACAGC ATCCCAGTAG ACGAAAGCAA GCTGGCAATC
CCCGAAGCCC ATCCGCACAA GTCACTGCAC TACAACCAGG GCGCGAGCTG CCTGGCCTGC
CATGGCGAGC ATGAGAAGAA GGCTCCGGTG TGCGCCGAGT GCCACCGCAC CTGGTTTGGT
GAGATGTAA
 
Protein sequence
MNKCIVTLLL GLALSSGVYA GELVKMKGKT QGRTNHEFIY QDGCQGCHQG SGKKNATDSA 
CVECHGEINS IPVDESKLAI PEAHPHKSLH YNQGASCLAC HGEHEKKAPV CAECHRTWFG
EM