Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0275 |
Symbol | |
ID | 4920726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 292382 |
End bp | 292750 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640161799 |
Product | tetraheme cytochrome c, putative |
Protein accession | YP_001092406 |
Protein GI | 127511209 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000173309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAAT GTATTGTAAC CCTCCTACTC GGGCTAGCAC TCTCATCGGG CGTCTACGCG GGCGAACTCG TCAAGATGAA GGGTAAGACC CAGGGACGCA CCAACCACGA GTTTATCTAT CAGGATGGCT GCCAAGGCTG CCATCAGGGT TCGGGCAAGA AGAACGCCAC CGACAGCGCC TGCGTCGAGT GTCATGGCGA GATCAACAGC ATCCCAGTAG ACGAAAGCAA GCTGGCAATC CCCGAAGCCC ATCCGCACAA GTCACTGCAC TACAACCAGG GCGCGAGCTG CCTGGCCTGC CATGGCGAGC ATGAGAAGAA GGCTCCGGTG TGCGCCGAGT GCCACCGCAC CTGGTTTGGT GAGATGTAA
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Protein sequence | MNKCIVTLLL GLALSSGVYA GELVKMKGKT QGRTNHEFIY QDGCQGCHQG SGKKNATDSA CVECHGEINS IPVDESKLAI PEAHPHKSLH YNQGASCLAC HGEHEKKAPV CAECHRTWFG EM
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