| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0270 |
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| Symbol | |
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| ID | 4920805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 286882 |
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| End bp | 287517 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640161794 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092401 |
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| Protein GI | 127511204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00090554 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCTCAA CGAAAACAAC ACCACCTTTT AAAAGAGAGC ATATTATGAC TAAGAAGACA
TTAGCAGTAG CCGCAGTCAT CACCGCAGCA TTGTCAGCGC CAACTATGGC AGCAGATTGG
TTCATCGGTG GCGGTATCGG TTCACAAGAG AACAACTACA AGGCAGAGAT CACCGAAGCG
GTCGATCCTG GCTTCAGCAA GGGCACCTTC AAAGATTCAG ATAGCGATAT GATCTATGAA
CTACGTGGCG GTGTTTACCT CAATGACAAC AACCGCGTAT ACGGTACTTA CTCTTACAAC
TCAGATGACT TCGCTAAGCA GCAGAGCTTC TTGATGTCTT ACGACTACCT GGTTGGCCTG
GATGCAAACA ACAAGTTCAA CTGGTTTATC GGTGCGACAG CCGGTGTGAA CCATGTGAGC
CCAGACACAG ACGTACTGGA ATCTAAGAAC CGCTTCGTAT GGGGTGGTCA AACAGGCTTC
ATGTACAAGA TCAACGACAG CCTGAGCACA GAGATCGGCT ACCGTTACCT GAAGCAAGAC
TATGAGAGAA GCTTCGCGTC AGACGCTGGC GACAAGGCAT CATTCTCACT GGATGACAGC
CAACAGGTTT ACCTGTCTGT AGACTACCGC TTCTAA
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| Protein sequence | MPSTKTTPPF KREHIMTKKT LAVAAVITAA LSAPTMAADW FIGGGIGSQE NNYKAEITEA
VDPGFSKGTF KDSDSDMIYE LRGGVYLNDN NRVYGTYSYN SDDFAKQQSF LMSYDYLVGL
DANNKFNWFI GATAGVNHVS PDTDVLESKN RFVWGGQTGF MYKINDSLST EIGYRYLKQD
YERSFASDAG DKASFSLDDS QQVYLSVDYR F
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