Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0248 |
Symbol | |
ID | 4923137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 267039 |
End bp | 267596 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640161772 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001092379 |
Protein GI | 127511182 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTG AATTGACCAC CGATCGTACC CGCATCCGCC TCTTGGAAGG CCATGAAGCC CAGATGTTGC TGCGATACTA TCTTGAAAAC CGTGAACATC TGGCCCCCTG GGAGCCTGAA CGCCGCGACG ATTTCTTCAT GCTTGCCCAT GCCCAATCTG TCGTGGCCGA GAATACCCGT CTGTATAAGG CGGGACTCGC CTTTAGATTC GCCATCCTGA ATCGAGAGCA GACTGAGATC ATAGGGCTGT GTAATATCAC CAACCTGGTG ATGGGGATTT TCAAGGCGGC AAACCTCGGC TATTCGGTCG CCGAGCGCTA CCAGGGACAG GGCTACATGA GCGAGGCGCT GCGGGCGCTA CTTGACTTCG TCTTCCACGA GGTGGGGCTG AATCGCGTGA TGGCCAACTA CATGCCTAAC AATGAAAAGA GTGCCCGGCT GCTGGCCTCA CTAGGCTTCG AGCGTGAAGG CTATGCCAAG TCTTATCTCA AGATTGCAGG AGAGTGGCAG GATCATGTCC TAACCGCCAA GTTGAATCCC AATCGGGATA AAGTTTAG
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Protein sequence | MTTELTTDRT RIRLLEGHEA QMLLRYYLEN REHLAPWEPE RRDDFFMLAH AQSVVAENTR LYKAGLAFRF AILNREQTEI IGLCNITNLV MGIFKAANLG YSVAERYQGQ GYMSEALRAL LDFVFHEVGL NRVMANYMPN NEKSARLLAS LGFEREGYAK SYLKIAGEWQ DHVLTAKLNP NRDKV
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