| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0243 |
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| Symbol | |
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| ID | 4922439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 260264 |
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| End bp | 261229 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161767 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092374 |
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| Protein GI | 127511177 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA TTGACCAACT TAATTACAAT CAATTAAAAG TGTTCATCGC CGTCTATGAA
CACGGGCAGA GTCATCAGGC TGCCAATGAA CTGGGTATTA CGCCTTCAGG TGTCAGCCGC
ACCCTTAAGA TCTTAAGAGA CATATTTAAA GACTCGCTCT TTATTCGTCG CTGTTCCGGT
TTCGTCGCGA CGGAGAAGAC CCACCAGCTG ATCCCTATGG CCAGAGAATT GGTGGCCCAC
TATCAAAAGC TCGAGATGCA GCACTCGGTA TTTACCCCGG CTGAATCGGG CGGCCAATAT
GTTATTCACG CCTACGATGA GTTCATCTAC CCAGTACAAC AGGTGATCCG CAACGAGATC
CTCACCGAGG CGCCCAACAT GAAGTTTGAT GTCAGGGTGC TGACCCATGA CTGCAGCAGC
GATCTCGCCA ATGGCGATGT CGACTTCGTG GTGGTCTATG AAGGCTTCAA CGGTAAGAAC
CTCAACGCCG AGATGTTTTC GGCAACAGAC AATCTCTACA TCCTGGCGCG CACCGGCCAT
CCGATCCTCA AGCAGGAACT CACCCTCGCC AACATCACCC AATATGCCTG CCTAGAGATA
GACAACTATG ACGACCTGAG TTGCCCGCTG CTGGTGAACC TCTGCCGCGA AGAGGAGCTG
TGCATGGAGG TCGACGGCTA TACCGACAGC GTGGCCACCG CCATGCGCCT GCTGAGCGAG
TCTGACGCCA TCACCTTAGT TTGCAACGAA TTTACCCGCC AGTTCGTCGA CATGTTGCCC
GCTGTGCAGT GGGTCAAGCT GCCCGAAGAG CTGGCCAAGC GTTGCCGTAT TCGTCGCCGG
GAAAACCGCG AGATAGGCAA TTACCTCTTA TATGGCAACG TGAATCAGTC GGCCGCCTTC
AACTGGGTGA AGTCTAAGCT CATCTGCGGC CTGGAAAGCG CCTGGCGCAG GGCGGCAGAA
CGCTGA
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| Protein sequence | MNKIDQLNYN QLKVFIAVYE HGQSHQAANE LGITPSGVSR TLKILRDIFK DSLFIRRCSG
FVATEKTHQL IPMARELVAH YQKLEMQHSV FTPAESGGQY VIHAYDEFIY PVQQVIRNEI
LTEAPNMKFD VRVLTHDCSS DLANGDVDFV VVYEGFNGKN LNAEMFSATD NLYILARTGH
PILKQELTLA NITQYACLEI DNYDDLSCPL LVNLCREEEL CMEVDGYTDS VATAMRLLSE
SDAITLVCNE FTRQFVDMLP AVQWVKLPEE LAKRCRIRRR ENREIGNYLL YGNVNQSAAF
NWVKSKLICG LESAWRRAAE R
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