| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0239 |
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| Symbol | |
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| ID | 4921911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 255646 |
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| End bp | 256626 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161763 |
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| Product | formate dehydrogenase, gamma subunit |
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| Protein accession | YP_001092370 |
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| Protein GI | 127511173 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAG CAATAAGATG GTTAAGCCTT ATTGTGCTCG GTCTGTTTGC ATCCAGTTAT
GCACTGGCCG AAGAGACCGC CACCCTGCAG CCGCAGCAGT GGCAAACCAT TCAGGAGCAC
GCCATCTCTG GTGATATTCC TGAGATCCGT GGCCTACCGA CTCAGCCTGA GCTGCTGATG
CCAGCGTCGA TTCCACAGCA AGCCGACGAG TCGCTGCTGG GCTACCTGGG CGCGACCGAT
ACCATCGCCT TCGCCCTGTT TGCCAGCTTG TTTGGCGTAA CCGCCCTCTT CATCCTATTC
GTGGTGGTGA ACGGCGTCTC TAAACTGGAC CATGGCTTCT CGGGTAAGCT GATCAAGCGT
TGGTCAGGCC TTAGCGTCAG TGTGCACTGG CTGGGTGCCA TCCCTTGCAT CCTGCTGATC
CTCACCGGCC TGGTGCTCGG CGGCGGCCGC TTCTACTTCG AGCCTGGCAT GAACGCGGGT
TCCTGGTCGG CCCTGGTGGG CCTATCCAGC AGCCTACATG AGTTGATGGC CTTCCCCTTC
ATCCTCGGCT ATGTGCTGAT GGTACTGATG TGGGCGCCTA AGCAGTTCCC CGCAAGCTAT
GACCTGAAAT GGTTTGCCGT ACTGGGCGGC TACATCAACT TCGGCAAGAA ACAGCATCCC
GATGCGGGCT TTGCCAACGC GGGTGAGAAG CTGTGGTTCT GGGTATTCGC CCTGTTCGGC
GGTGTCATGG TGGTCTCTGG CCTGGCGATG ATGTTCCCCG AGACCTATGG CGTCACCAAG
AACACGGCCA ATCTGATGCT GGTATTGCAT ATTGCCTCAA CCGTCATCAT CAGCGCCTTC
TCTGTGGTGC ATATCTTCAT GGCGACCGTG ATGTCCGAAG GCGGCATGTC AAACATGACC
TCTGGCTACT GTGACGAAAA CTGGGCCAAA CAGCATCACA ACCTCTGGTT CGCCGACCTG
AAGAAGGCTG GCAAGGTTTA A
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| Protein sequence | MSKAIRWLSL IVLGLFASSY ALAEETATLQ PQQWQTIQEH AISGDIPEIR GLPTQPELLM
PASIPQQADE SLLGYLGATD TIAFALFASL FGVTALFILF VVVNGVSKLD HGFSGKLIKR
WSGLSVSVHW LGAIPCILLI LTGLVLGGGR FYFEPGMNAG SWSALVGLSS SLHELMAFPF
ILGYVLMVLM WAPKQFPASY DLKWFAVLGG YINFGKKQHP DAGFANAGEK LWFWVFALFG
GVMVVSGLAM MFPETYGVTK NTANLMLVLH IASTVIISAF SVVHIFMATV MSEGGMSNMT
SGYCDENWAK QHHNLWFADL KKAGKV
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