| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0169 |
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| Symbol | rplX |
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| ID | 4920874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 184723 |
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| End bp | 185037 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640161688 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_001092300 |
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| Protein GI | 127511103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000484148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000323291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGCTA AAATCCGTCG TGAAGACGAA GTAATTGTAC TAGCAGGTAA AGACAAGGGT
AAACGCGGTA AGGTTTCTCG AGTTTTACCA ACTGGTAAAT TAATTGTAGA AGGCATCAAT
CTGATCAAGA AGCACCAGAA GCCTAACCCA CAAATGGGTG TGACTGGTGG TATCGTTGAG
AAAGAAGCGC CAATACAAGC ATCAAATGTA GCGATTTTCA ACTCTGCCAC TGGCAAAGCT
GATCGCGTTG GTTTCCGATT TGAAGACGGC AAAAAAGTCC GTTTCTTTAA GTCGAACAGT
GAACTCGTTA AGTAA
|
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| Protein sequence | MAAKIRREDE VIVLAGKDKG KRGKVSRVLP TGKLIVEGIN LIKKHQKPNP QMGVTGGIVE
KEAPIQASNV AIFNSATGKA DRVGFRFEDG KKVRFFKSNS ELVK
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