| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0133 |
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| Symbol | |
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| ID | 4922055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 141645 |
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| End bp | 143507 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161644 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001092264 |
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| Protein GI | 127511067 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.449425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTAA CCAAGCGGTT TTTCCCCTAT TTTGCGACCC AGTGTCTGGG CGCGCTTAAC
GATAATATCT ACAAGAATGT GCTGCTGCTG ATGGTGACCT ACAGCCAGAT AGAGAGCCTA
CCCATTAGCG TCAACCTATT TGTTAACCTC GCCGCCGGCG TATTTATCCT GCCTTTCTTC
CTGTTTTCCG CCCACGCGGG TGTGGTGGCA GATAACATGG ATAAGGCCAA ATTGATCAGA
CGCTTAAAGC AGCTCGAGTT GGTGATCATG TCCTGCGCCG CCATGGCGAT CTTGACCCAG
AGTTACATGA TGATGTTGCT GCTGCTCTTC TTGACCGGTA GCCAGTCGGC CTATTTTGGG
CCGGTCAAAT ACTCGCTGTT GCCTCAGGCG CTTGCGGAAG ATGAGCTGGT GACGGGCAAT
GCCTGGGTGG AGATGGGCAC CTTCTTGTCG ATCTTGATAG GTACACTCAG TGCCGGGCTT
CTGGTGGCCA GCGACAAGGG CATTATAGCT ACCGCGGCGA CCGTGTTTGT GCTGGCCGTT
GCCGGCTATC TGGCCAGCCG CGCGATCCCT GCCATGCCGC CGCAGGGAAA TGTCACTAAG
ATACGTTTCG CGCCTCTGTC TGGCACCTGG CGCAGCATCG CCAAGGTGAG GAAGACGCCG
AGTATCTGGA TGGCCATCTT AGCGATCAGC TGGTTCTGGT TCCTCGGGGC GACCTATCTG
ACCCAGTTCC CCAACTTTGC CAAGTTGCAT CTGCACGCCG ATGCCACCGT GGTCTCACTC
CTGTTGGCGC TGTTCTCTAT CGGGATTGCC GCGGGCTCCT TCCTGTGTGA GCGCTTCTCC
TTCGGCCATG TGGAGCTGGG GCTCTTGCCC TTCGGCGTGG CTGGGCTAAC TCTGTTTGGT
GTGGATCTGC TGTGGTCGCT GCCCGAGTTG CCCGCCCAGG CTGAGACCAT CTATAGCTTT
AGCAGCTTTA TCGCCGAGTC ACAGCACTAT CGGGTGATGT TTGCCCTGTT TATGGTGGGG
GTGAGCGGCG GTCTGTTTAT CGTGCCCCTG TACGCCTTTA TTCAGTCGCG TGCCGACCGG
GGTGAGTGTG CCCAGGCCAT CGCCGCGAAC AATATCATGA ACGCCCTGTT CATGGTGGTC
TCGGCGGTCA TGTCTATCTT GCTGCTAGAG GTGTTTGGCT GGCAGATCAC AGAGCTCTTC
CTATTGCTGG CGCTGCTCAA TGCCGTCGTC GCCCTCTATG TCTATAGTCA GGTGCCCGAG
TTTACCCAGA GATTTGTCAG TTACCTGCTG AGCCATATCC TGTATCGCGT CACAGTTACC
GGCCGCGACA AGCTGCCCAG CGAAGGTGCC GGCATCATAG TGTGCAACCA TGTGAGCTAT
GTGGATGCCT TGATCATCAT GGGCGCCTCG ACCCGCCCGA TCCGTTTCGT GATGGATAAA
TCTATCAGCG AGATGCCGCT GCTCAAGTAT CTGTTTCGCC ATGCGGGTGT GATCCCCATC
TGTTCACCGC GGCAGAGTGA GGCGACCTAT AATCAGGCGT TCGAGTCTAT CCATCAGGCG
CTGGCCGATG GCGAGCTGGT GTGTATCTTC CCCGAGGGGC GTCTGACGCC TAACGGTGAG
TTGGGCGAGT TCCGCCCCGG TATCGACAAG ATCCTCGCCC GCGACTCCGT GCCTGTTATC
CCTATGGCCC TCAACGGCCT CTGGGGTTCC TACTTCAGCC ACAAGGATGG CCATGCTCTG
AGTACTAGGC CAAAGCGCTT CTGGTCTAAG ATCTCGGTTG ATCTGGATGA TGTGGTGTCG
GGCACAGAGG CTAACCGCCA TCTGCTGCGA GAGCGGGTCG AGGCCATGTT GCCCGCATCC
TAG
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| Protein sequence | MLLTKRFFPY FATQCLGALN DNIYKNVLLL MVTYSQIESL PISVNLFVNL AAGVFILPFF
LFSAHAGVVA DNMDKAKLIR RLKQLELVIM SCAAMAILTQ SYMMMLLLLF LTGSQSAYFG
PVKYSLLPQA LAEDELVTGN AWVEMGTFLS ILIGTLSAGL LVASDKGIIA TAATVFVLAV
AGYLASRAIP AMPPQGNVTK IRFAPLSGTW RSIAKVRKTP SIWMAILAIS WFWFLGATYL
TQFPNFAKLH LHADATVVSL LLALFSIGIA AGSFLCERFS FGHVELGLLP FGVAGLTLFG
VDLLWSLPEL PAQAETIYSF SSFIAESQHY RVMFALFMVG VSGGLFIVPL YAFIQSRADR
GECAQAIAAN NIMNALFMVV SAVMSILLLE VFGWQITELF LLLALLNAVV ALYVYSQVPE
FTQRFVSYLL SHILYRVTVT GRDKLPSEGA GIIVCNHVSY VDALIIMGAS TRPIRFVMDK
SISEMPLLKY LFRHAGVIPI CSPRQSEATY NQAFESIHQA LADGELVCIF PEGRLTPNGE
LGEFRPGIDK ILARDSVPVI PMALNGLWGS YFSHKDGHAL STRPKRFWSK ISVDLDDVVS
GTEANRHLLR ERVEAMLPAS
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