| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0132 |
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| Symbol | |
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| ID | 4920464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 140998 |
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| End bp | 141654 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161643 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001092263 |
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| Protein GI | 127511066 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.817295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAC GCAAAGAACA TACTCATGAT GAGATCCGGG CGATGGCAAC CGCCGCCGTG
CTGCGCCACC TGGAGGTCGA GCCGCTCGAT AGCCTGAGCC TGCGCAAGGT GGCGGCGGCC
ATAGGTTATG TGCCCAGTAC GCTGGTGAAT CTCTTCGGCA GCTATCAGGG CTTGCTGCTG
GCGGTTGCCG AGCAGACCCT GGATGAACTG TATAAGCGCC TGGCTGCTAA AGCTCAAGCT
TTTCAAGATT ATGCATCTCA AGAGCAAGCT GCTCAAAGCC AAGCGTCTGA GTCGAGTCAG
CTTGAGGCGA TGGCCGGGGC CTATCAGCAA TTTGCTTTCG CGCAGCCAAG GGCGTTTCAG
CTGATCTTCG AGCTAAAGGC GACGGAGGAG CAGGGGCTGA GCGATCACCA TGCCCAGCTA
ATCGCGCAGC TGTTCGGCCT GATTGAGTCA TGCCTGGCGC GTCTGCTGCC CGAGCTTCCG
GCCGAGCAAC TATTACTGGC GAGCCGCGCC CTGTGGGGCG GCGTCCATGG TCTGGTGAGT
CTGGCGCTGG ATGATAAGCT CTTTGCCCCA GGGATCGGTA TTGAGCAGGC CATTAGTCAT
CATCTCGCGG TACAACTTAA AGGATTGGGT TATCACAAGG AGGCGTTATG TTGTTAA
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| Protein sequence | MARRKEHTHD EIRAMATAAV LRHLEVEPLD SLSLRKVAAA IGYVPSTLVN LFGSYQGLLL
AVAEQTLDEL YKRLAAKAQA FQDYASQEQA AQSQASESSQ LEAMAGAYQQ FAFAQPRAFQ
LIFELKATEE QGLSDHHAQL IAQLFGLIES CLARLLPELP AEQLLLASRA LWGGVHGLVS
LALDDKLFAP GIGIEQAISH HLAVQLKGLG YHKEALCC
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