| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0113 |
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| Symbol | |
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| ID | 4921465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 124836 |
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| End bp | 126896 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161624 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001092244 |
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| Protein GI | 127511047 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCG ATCTGAGTCA ATTCAGCCAA GTCTTCTTTG AAGAAAGCCT TGAGGGCTTG
GAAAGCATGG AGTCCGAGCT GCTGAAGCTA GATATCGCCG CGCCGGATCC CGAGGCGATC
AACACCATCT TTCGCGCCGC CCACTCCATC AAGGGGGGCA GCGGCACCTT CGGTTTTAAC
CAGGTCGCCA ACTACACCCA CCTGCTAGAG ACGCTGCTGG ATGAGATCCG CGACGGCCGC
CGCGAGATGA CCAGCCATCA TCAGGACATA CTCCTGCTGT CGGTCGACCT GCTGCGTAAC
ATGCTCGACG CCGTCATGCA TCAGCAAACC TTCGACGATC CCATGCTCAG CGATCTGGAG
CAGAAGTTTG CCGCCGAGCT ATCCCAGGGC GAGTCACAAG AAGATGAAAC CCAGCGCGAA
CCCGAGACGC CAGAACAGAC GACCTGGCAG ATCAGCTTCA AGGCCGGCAC GGACATCCTC
AGGTACGGTA ACGACCCTTT GCTGATGTTC AACGAGCTGG GTCAGTGCGG AGAACTCAGT
GTCGAGCTAC TGCCGCAGGA GATCCCCGAC TTCACTCAAT ATGACCCCGA GGCCTGCTAC
CTCGCCTGGT CGCTCACCCT CACCACAGAC CAACCCCTTT CGCGTCTTAA GGAAGCCTTC
GAATGGGTCG AGGATGAGTG CGACATTGAC TATCAGGCTC AGCCCAAGGC GAGCGAGGCC
AGTGAGATAA CGACTGAGAA AGAGATAGAG GCGACGGCAG AAAGCGATAT TCAGGCCAGT
ACTCAAACAA CTACCCCAGC TAGTGTCCAA CCCGAAAAAC CCGCAAGCCA GACTAGGCCC
AGCGTGGTCA GCAGCAAGAC CCAGGACGCC GGATCCATCC GCGTCAGCAT AGAGAAGATA
GATCTGCTGA TCAATATGGT GGGCGAGCTG GTGATCACCC AGGCCATGCT GGGCCAGATA
GGTCAGCAGG AGGAGATGAC GCCCGAGTCC TTCATCACCA TGAAGCAGGG GCTGGAGCAG
CTAGCCAGCC ACACCCGGGA TCTGCAGGAG AGTGTCATGC AGATCCGCAT GCTGCCCATC
AGCTTCGCCT TCAACCGCTT CCCCCGTCTG GTACGGGACA TAGGCCAGCA ACTGGGTAAA
AAGGTGGAGC TGATCCTCAA GGGGGAAGAT ACCGAGCTGG ACAAGACGGT AATGGAGAAG
ATAGTCGACC CTATGGTGCA CCTGGTAAGA AACTCCCTCG ACCATGGCCT GGAGACCCCG
GAGGTGCGCC GTCAGAAGGG CAAGCCCGAA ACCGGCACAC TCACCCTCAA TGCCTTCCAT
CAGGGCGGTA ACATCATCAT AGAGATCATC GATGACGGCG CCGGTCTCAA CACCCAGAAA
ATTCTCGATA AGGCACGCGC CAAGGGACTA GTCGGCAGCG ACGAAGAGCT GAGCGAAGAG
GCCATTCACC AGCTGATCTT CAAACCCGGC TTCTCTACCG CAGAGACGGT CTCAGACCTC
TCCGGCCGCG GCGTCGGCAT GGATGTGGTG CTGAGAAACA TTCACGAACT CAACGGCACC
ATAGAGCTGA AATCCACCCA GGACAAGGGT AGTCGCTTTA CCATACGCCT GCCGCTCACC
CTGGCGATTC TCGACGGTCA GTTGGTACGC ATCGGCACGC ACACCTATGT GGTGCCCCTA
GTGGCAATTC ACGAGTCGCT CGAGGTGCCC GCCGCCCATA TCAATCGCCT GAGTGAAGAA
CATGAGGTGA TTCGTCTGCG GGACGAATAC CTGCCAGTGC TCAAGGTCTA TGAGGCCTTC
CATCACGAGG CAGATGCCAA ACAGATTAAA GATGGCCTGG TGATGGTAGT CGATGCCAAC
AACGATAAGG TAGGACTCCT GGTCGACGAG CTGCTGTCCC AACAGCAGGT GGTGATCAAG
AGCCTGGAAG ACAACTACAG CAAGGTGGCC GGTATTTCGG GCGCCACCAT ACTCGGCGAC
GGTACCGTTG CCTTGATCAT AGACATTGCC GGATTAGTCA GCCTCGCGGG CATCAACAGT
ACCCAAGAGC ACGCCGCCTA G
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| Protein sequence | MEIDLSQFSQ VFFEESLEGL ESMESELLKL DIAAPDPEAI NTIFRAAHSI KGGSGTFGFN
QVANYTHLLE TLLDEIRDGR REMTSHHQDI LLLSVDLLRN MLDAVMHQQT FDDPMLSDLE
QKFAAELSQG ESQEDETQRE PETPEQTTWQ ISFKAGTDIL RYGNDPLLMF NELGQCGELS
VELLPQEIPD FTQYDPEACY LAWSLTLTTD QPLSRLKEAF EWVEDECDID YQAQPKASEA
SEITTEKEIE ATAESDIQAS TQTTTPASVQ PEKPASQTRP SVVSSKTQDA GSIRVSIEKI
DLLINMVGEL VITQAMLGQI GQQEEMTPES FITMKQGLEQ LASHTRDLQE SVMQIRMLPI
SFAFNRFPRL VRDIGQQLGK KVELILKGED TELDKTVMEK IVDPMVHLVR NSLDHGLETP
EVRRQKGKPE TGTLTLNAFH QGGNIIIEII DDGAGLNTQK ILDKARAKGL VGSDEELSEE
AIHQLIFKPG FSTAETVSDL SGRGVGMDVV LRNIHELNGT IELKSTQDKG SRFTIRLPLT
LAILDGQLVR IGTHTYVVPL VAIHESLEVP AAHINRLSEE HEVIRLRDEY LPVLKVYEAF
HHEADAKQIK DGLVMVVDAN NDKVGLLVDE LLSQQQVVIK SLEDNYSKVA GISGATILGD
GTVALIIDIA GLVSLAGINS TQEHAA
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