| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0105 |
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| Symbol | |
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| ID | 4920542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 113788 |
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| End bp | 116325 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161616 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_001092236 |
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| Protein GI | 127511039 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAC TCTGCCTTTT GCTGCTTTCT ATCGTCCCCC TGCTCCTAAG CTTTGCGACA
AATGCCCAAA GCGTGATCTC AGTCGCGTCC GCTACCCAGA GTGACAGCAG CCTAGCGTCG
CCTAGCGAGT TTCTCGGTTA TCCCCTCGGC CAGTGGCATC TGCGCCACGA CCAGATCAAC
TACTACCTCA AGCAGTTGGC CCAAAACAGC CCCAGAGTCA GCCTGGAATC CACCGGACAG
AGCCACGAGA CCAGGCAGCA GCTCACGGCG GTGATCACCT CCGCCGCCAA TCAGGCCAGG
CTGGCAGAGA TAGTCCAGGG ACGTCAACAG GTCAAGGCGG GTAAGGCACC CGAAAGCCCA
CTTATCATCT GGCTGGCCTA TTCGATTCAT GGCGACGAGG CCAGCGGCGC CCATGCGGCG
CTTGAGGTCA GCTATCGCCT CAGCCAGAAC CAGGAGCCCT GGGTGCAGGA GCTACTGGAC
AAGGCCGTGG TACTGATCAC CCCATCGCAA AACCCCGACG GCCTGGATCG CTTCTCCACC
TGGACCAACA ACTACACAGG CAAGGTGAAG GTGAGCGATG AGAATCACAA CGAGCACAGA
CAGAACTGGC CGGCCGGCAG GCGTAACCAC TATTTTGCCG ACTTGAACCG CGACTGGCTG
TTCCTGCGCC ATCCAGAGTC TCAGGGGCGC ATCGCCCTGT TCCATAAGTG GCAGCCGCAC
TATCTGGGCG ACTTCCACGA GATGGGCCAT AACCAGACCT TCTTCTTCCA GCCGGGCGTG
CCGACACGTA CCCATCCGCT GACTCCCAAA GAGAATCAGG TGATAACCTC AAAGCTCGCC
AGTTTCCACG CCAAGGCGCT GGATGAGAGC AAGCAGCGCT ATTTCACCAA GCAGATGTTT
GATGACTTCT ACTACGGCAA GGGCTCGACC TATCCAGACA TCAACGGCGC CGTGGGCATA
TTGTTCGAAC AGGCCAGCGT GCGCGGCCAG CAGCAGGATT CTGAAAACGG CCTGCTGCGT
TTTAGTCAGG CCATAAACAA CCAGATCGCG ACCTCCTTCT CCAGTCTCAA GGGGGCCCTG
GCACTGGCAG ATGAGCTGAA GCAGTATCAG AGCCGCTTCT ATCAGCGCAA AGACAAACAC
CCACCTTCGG GCCGTGAGGC CGGCTTCCTG CTTGGCGCGC CGGGGGATCC GGGCAGACGT
GACGATCTCG CCCAGCTACT GAGCCGTCAT GGAATAGCCT TCTTCTATCT CAAGGACAAG
ATGCAACAGG GCAGACACCA ATACAGCCAG GACGACAGCC TGTTTGTCCC CATCAATCAG
CCGCAGAAGA CACTGCTGCT GGCGATGTTC GATCTGCGCA CCGAATTTGA AGACGCTACT
TTCTACGACG TCTCCAGCTG GAACCTCGCC TTCTCCTATA ACCTGCAGAT GGCCCGTAAC
GTTAACCTGA ATGTCGACGA CCTGCTCACC GAGCCGCACG CCAGAGTGCC CGACACCCTG
AGCAGCAATA ACGTCGCGGT ATTAATCGAT TGGCGACAGC AGAACGCCGC GCCCATGTTG
CAGACCCTGC TTAGCGAGGG TGTTCGGGTC AAGTTTGCTG CCAAACCCTT TAGCCTTAAG
GTCGATGGCC AGTCTCTGAA CATGGAGGCC GGCACCCTGC AGATCCCAGT TGCCCAAGCC
GCCATGACGC CGAGGGAACT GATCGACAGG CTTACTTCGC TCGCCGAGCA GTATCGGGTG
CAGCTACAGG GAGTCGATAG TGGACTCGCC AGCTCAGGGA TAGATCTTGG CAGCCCGGAT
TTTCATGACA TAGCCCCCAT CAAGGCCTTG GTTGTCACCG GCTATGGCAC CTCATCGGCC
GAGGTGGGTG AGCTCTGGTA TTTCATGGAC AATCTTATCG GCGCGCCCCT GACCCAGGTC
GATATCAGCC GCCTACCGAG CATAGAGCTG GCAGCTTACA CCCATCTGTT CTTGATGGAT
GGCAGCTATG CCAACCTGGA TGAGAAATAT GCCCGCAAGC TTGGGCAGTT CGCCATTGAA
GGCGGAGTGA TCGTCGCGCA GAAAGGCGCG CTGCAGTGGC TCTCCAAGGG CAACCTGCTC
AAGAGCGACA TCAGAGAGAA GCGCTACTTC AGCCAGCTGT TTGCCACCGA TGGTCTCTCT
TTTGGCGATA AGGCTAAGCT GGATGCCCGC CAGGCGATCG GCGGCGCCGT ATTGGCGCTG
GATCTCGACA CCAGCCACCC GATCACCTTC GGCCTAGGCA CTAATCGCCT ACCCGTGCTG
AAGAACAAGG TATTTGGTCT GAGTAAGAGC CAGGCCCCCT TCATCACGGC CGCCAGCTAT
GCCGACGAGC CCCTGCTGGA TGGTTTCCTA GCCGAGGAGT ATCAGCGCAG CCTGAGTCAG
ACCCCAGCCA TTGTCGTGGA GCGCCACGGC AAGGGCGCCC TGGTCGCCTT GGCCGATAAC
CTCTTGTTTC GCAATATCTG GCTCGGCTCG CAGAAGGTGT ACGCCAACAG CCTCTACTTC
ATTCCGGCCC TACATTGA
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| Protein sequence | MLRLCLLLLS IVPLLLSFAT NAQSVISVAS ATQSDSSLAS PSEFLGYPLG QWHLRHDQIN
YYLKQLAQNS PRVSLESTGQ SHETRQQLTA VITSAANQAR LAEIVQGRQQ VKAGKAPESP
LIIWLAYSIH GDEASGAHAA LEVSYRLSQN QEPWVQELLD KAVVLITPSQ NPDGLDRFST
WTNNYTGKVK VSDENHNEHR QNWPAGRRNH YFADLNRDWL FLRHPESQGR IALFHKWQPH
YLGDFHEMGH NQTFFFQPGV PTRTHPLTPK ENQVITSKLA SFHAKALDES KQRYFTKQMF
DDFYYGKGST YPDINGAVGI LFEQASVRGQ QQDSENGLLR FSQAINNQIA TSFSSLKGAL
ALADELKQYQ SRFYQRKDKH PPSGREAGFL LGAPGDPGRR DDLAQLLSRH GIAFFYLKDK
MQQGRHQYSQ DDSLFVPINQ PQKTLLLAMF DLRTEFEDAT FYDVSSWNLA FSYNLQMARN
VNLNVDDLLT EPHARVPDTL SSNNVAVLID WRQQNAAPML QTLLSEGVRV KFAAKPFSLK
VDGQSLNMEA GTLQIPVAQA AMTPRELIDR LTSLAEQYRV QLQGVDSGLA SSGIDLGSPD
FHDIAPIKAL VVTGYGTSSA EVGELWYFMD NLIGAPLTQV DISRLPSIEL AAYTHLFLMD
GSYANLDEKY ARKLGQFAIE GGVIVAQKGA LQWLSKGNLL KSDIREKRYF SQLFATDGLS
FGDKAKLDAR QAIGGAVLAL DLDTSHPITF GLGTNRLPVL KNKVFGLSKS QAPFITAASY
ADEPLLDGFL AEEYQRSLSQ TPAIVVERHG KGALVALADN LLFRNIWLGS QKVYANSLYF
IPALH
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